Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq13 149 7e-31 seq1 116 4e-21 seq2 98.7 1e-15 >seq13 Length=199142 Score = 149 bits (164), Expect = 7e-31 Identities = 121/147 (82%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 62569 CTGCGTCGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACC 62628 ||||| || ||||| ||||||||||||||||| ||||| ||||| |||||||||||||| Sbjct 145476 CTGCGCCGCGAAACGCTGGAAGATGCAGTTAAACATCCTGAAAACTATCCGCAGCTGACT 145417 Query 62629 ATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGAC 62688 ||||| || || || ||||| || || |||||||| || || || || |||||||||||| Sbjct 145416 ATCCGCGTTTCAGGCTATGCCGTGCGTTTTAACTCACTCACGCCTGAGCAGCAGCGCGAC 145357 Query 62689 GTTATCGCTCGTACCTTCACCGAGAGT 62715 || || | |||||||| || || ||| Sbjct 145356 GTGATTACCCGTACCTTTACTGAAAGT 145330 >seq1 Length=970878 Score = 116 bits (128), Expect = 4e-21 Identities = 268/401 (67%), Gaps = 2/401 (0%) Strand=Plus/Minus Query 152001 TGCCAACTCCTATTATGGCTGGTTGTCGTACTCCTACTCGACAGTTCAGTTCATGCGTTG 152060 |||| || || || ||| |||| || || || || || |||||||| || || || Sbjct 158672 TGCCGACGCCAATCATGTCTGGCGTACGCACCCCAACACGTCAGTTCAGCTCCTGTGTGC 158613 Query 152061 TTATTGAGGCAGGAGATTCGCTGAAGTCTATCAATAAGGCTTCTGCTTCAATTGTTGAAT 152120 | || ||| || || ||| | || ||||| | || ||||||| ||| Sbjct 158612 TGATCGAGTGCGGCGACAGCCTGGACTCCATCAACGCCACCTCCAGCGCAATTGTGAAAT 158553 Query 152121 ATATCTCCAAACGAGCTGGAATCGGCATTAACGTTGGTATGATTCGTGCCGAAGGTTCTA 152180 || |||| | || || || ||||| || |||| ||| || ||||| || Sbjct 158552 ATGTCTCTCAGCGTGCCGGCATCGGTATCAACGCCGGTCGTATCCGTGCGCTGGGCAGCC 158493 Query 152181 AGATTGGCATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAACATTTTCAGA 152240 |||| || ||||||| |||||| || ||| || || | || ||||| |||| Sbjct 158492 CGATTCGCGGCGGTGAAGCGTTCCATACCGGCTGTATCCCGTTCTACAAGCATTTCCAGA 158433 Query 152241 CTGCTGTTAAATCATGCTCACAGGGTGGAATTCGTGGCGGCGCTGCTACTGCT-TATTAT 152299 | || || || || || || ||||| || ||||||||||||| || || ||| | || Sbjct 158432 CCGCGGTGAAGTCCTGTTCTCAGGGCGGCGTTCGTGGCGGCGCAGCCAC-GCTGTTCTAC 158374 Query 152300 CCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAAGGCGTAGAA 152359 || || |||||| ||||| | |||| || || || |||| || ||| || || ||| Sbjct 158373 CCGATGTGGCATCTGGAAATCGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGTGTTGAA 158314 Query 152360 GAAAACCGCATCCGTCATATGGATTATAGTGTTCAGCTGAA 152400 | |||||| | ||||| ||||| ||| |||| ||||| || Sbjct 158313 GGCAACCGCGTGCGTCACATGGACTATGGTGTACAGCTCAA 158273 >seq2 Length=722220 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 62575 CGTGAAACTCTGGAAGATGCAGTTAAGCATCCGGAAAAATATCCGCAGCTGACCATCCGT 62634 ||||||| ||| ||||| | | ||||| || ||||||||||| |||||||| || Sbjct 515192 CGTGAAATGCTGCTGGATGCGATGGAACATCCAGAGAAATATCCGCAACTGACCATTCGC 515133 Query 62635 GTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCGGAACAGCAGCGCGACGTTATC 62694 || |||||||| || || ||||||||||| |||||| || ||||||| || || || Sbjct 515132 GTTTCCGGTTACGCTGTGCGCTTTAACTCACTGACTAAAGAGCAGCAGCAGGATGTGATT 515073 Query 62695 GCTCGTACCTTCAC 62708 | || |||||||| Sbjct 515072 ACCCGAACCTTCAC 515059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546292504825200