Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031048.1 Length=41918 Score E Sequences producing significant alignments: (Bits) Value seq3 116 1e-21 >seq3 Length=630259 Score = 116 bits (128), Expect = 1e-21 Identities = 189/272 (69%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 26926 GATTTCAGTGGTGTAGCGCTCAACGCCTTGCTGATCAGTCCATTTACGGGTTCGCAGACC 26985 || ||| |||||||| ||||| ||| |||||| |||||||||||| ||||| Sbjct 51115 GACTTCGGTGGTGTAACGCTCCTGGCCACCCTGATCCTGCCATTTACGGGTGCGCAGCTG 51056 Query 26986 GCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTATTCACCAGCGATTTCCGCCAGCTT 27045 |||||| || | |||| ||||| |||||||||||| |||| ||| ||||| || Sbjct 51055 GCCTTCGATATAGACCTGCGATCCTTTTTTCAGGTATTCACCCGCGACTTCAGCCAGTTT 50996 Query 27046 GCCGAAGATGACAACGCGGTGCCATTCCGTCTGCTCTTTTGGTTCGCCTGTGGCCTTATC 27105 ||| || | || || |||||||| || || |||||| ||| || || ||| || Sbjct 50995 GCCAAACAGCACCACACGGTGCCACTCAGTGATCTCTTTGTTTTCACCGGTCTGCTTGTC 50936 Query 27106 TTTCCACTTTTCGGTTGTGGCAATGCTGAGATTGGCAACTGCGCCACCTGACGGCATGTA 27165 ||| |||| | || || | | | |||||||| |||||||| ||||| || Sbjct 50935 GCGCCAGCTTTCCGACGTAGCCAGCGTAATGTTGGCAACAGCGCCACCATTTGGCATATA 50876 Query 27166 GCGCACTTCTGGATCGTTGCCTAAATTACCGA 27197 || ||||| ||||| | || | ||| |||| Sbjct 50875 ACGTACTTCCGGATCCTGACCCAGATTCCCGA 50844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134005864118640