Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq4 179 2e-40 >seq4 Length=447486 Score = 179 bits (198), Expect = 2e-40 Identities = 511/770 (66%), Gaps = 29/770 (4%) Strand=Plus/Minus Query 821 GGCAAGTCGAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCTG 880 |||| | | || | ||| || ||||||||||| ||||| | || || |||| || Sbjct 112197 GGCACGCCAAAAGCTGACCGTACCGGCACCGGTACGCTTTCAATTTTTGGTCACCAGATG 112138 Query 881 CGGTACGACCTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCG 940 || | | | || || || || |||||||||||||| ||| || || ||| Sbjct 112137 CGTTTCAATCTGCAGGATGGTTTTCCGCTGGTCACCACCAAGAAATGTCATATCCGCTCG 112078 Query 941 GTTGCGTACGAACTTCTGTGGTTCCTCAGTGGCGACACGAACGTGAAGGCGCTCAACGAC 1000 || | || || |||||||| || | ||||| || ||| | ||||| || Sbjct 112077 ATTATTCATGAGCTGCTGTGGTTTCTGAAAGGCGATACCAACATCGGTTATCTCAAAGAA 112018 Query 1001 AACGGCGTCACCATCTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTAC 1060 ||| |||| |||||||||| |||||||| || | || | ||||| || || || Sbjct 112017 AACAACGTCTCCATCTGGGATGAGTGGGCGGATGAGAATGGCGATCTCGGCCCGGTGTAT 111958 Query 1061 GGCGCGCAGTGGCGGCACTGGC--ATGTCGAGGACGG--AGGATCGTCGTGGATTGACCA 1116 ||| |||||||| |||| | | | || ||| |||| ||||||||| Sbjct 111957 GGCAAACAGTGGCGCAGCTGGGGAACGGCCAG--CGGCCAGGA--------GATTGACCA 111908 Query 1117 GATCTCGGCCGCCG-TGGAGCTGCTTC-GCGAGGACCCTGACTCGCGCCGGAACGTGGTA 1174 | | | | | | |||||| ||| ||| | ||| ||||| ||||||| | || Sbjct 111907 GTTAA-GCCAGGTGATGGAGCAGCTGAAGCGCGATCCC-GACTCACGCCGGATTATCGTT 111850 Query 1175 TCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTC 1234 || || ||||||||||| || || ||||| ||||| || || |||||| | ||| Sbjct 111849 TCTGCCTGGAACGTCGGCGAGCTGAGCGAGATGGCGCTGGCTCCTTGCCACGCGTTCTTC 111790 Query 1235 CAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGC-AGGTCTACCAGCGCAGCGCG-GACA 1292 ||| | ||||| | |||||| ||||| |||| || |||| |||||| || | |||| Sbjct 111789 CAGTTCTACGTGGCGGACGGCAAACTCTC-CTGCCAGCTCTATCAGCGCT-CGTGCGACA 111732 Query 1293 TGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGC 1352 | ||||| || ||||||| || |||||| || ||| | || | || ||| | |||| Sbjct 111731 TCTTCCTGGGCCTGCCGTTTAACATCGCCAGCTATGCGTTGCTGGTACATATGGTGGCGC 111672 Query 1353 AGCAGGCCGGCCTGCGGGTGGGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACA 1412 ||||| || |||| |||||| || | ||||||||||||| || |||| |||||| Sbjct 111671 AGCAGTGCGATCTGCAGGTGGGCGACTTCGTCTGGACCGGCGGTGATACCCACCTCTACA 111612 Query 1413 ACAACCACGTCGACCAGGCGCTGATGCAGCTCCGCCGACGACCGCGGCCCTACCCGAGGC 1472 ||||| | || ||||||| ||||||| ||| |||||| || || | Sbjct 111611 GTAACCATCTGGAGCAGGCGCGCCTGCAGCTGACCCGCGAACCGCGTCCGCTGCCATCAC 111552 Query 1473 TCGTGCT---ACACCACGCGCCGTCGATCTTCGACTACCGGTACGAGCACATCCACCTCG 1529 | || | || | | || ||||| | || ||||| | || ||| | | | | Sbjct 111551 TTGTTATCAAACGCAAACCGGCGTCGCTGTTTGACTATCAGTTCGAAGATTTTGAGAT-- 111494 Query 1530 TGAA--CTACGACCCGCACCCGTCGATCAAGGCGCCGGTGGCCGTCTGAT 1577 |||| |||||| ||||| || ||||||| || || || ||| |||||| Sbjct 111493 TGAAGGCTACGATCCGCATCCCGCGATCAAAGCCCCTGTCGCCATCTGAT 111444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296108213648469