Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq9 482 6e-132 seq174 176 1e-39 >seq9 Length=205880 Score = 482 bits (534), Expect = 6e-132 Identities = 1016/1505 (68%), Gaps = 35/1505 (2%) Strand=Plus/Plus Query 32094 GCTGGCGGCGTAATGTCACGCTCTACGCGCGGTGTTGTCTCCTGCAATTCGTCAGGGGTG 32153 |||||||| || | ||| || ||| | | | | || ||| | ||| || || ||| Sbjct 168142 GCTGGCGGTGTCACGTCGCGTTCTGCAGGAGATAAGGTTTCCAG---TTCATCCGGTGTG 168198 Query 32154 TAGACACCCATGATGACGTCAGGGCAATGCAGGCGTGACCAGCGCTTTGTCGCCAGGTAT 32213 || || |||| |||||||| ||||| ||||| || | |||||| || || || || Sbjct 168199 TACACCCCCAGAATGACGTCCGGGCAGTGCAGACGGGCCCAGCGTTTAACAGCGAGATAA 168258 Query 32214 GCGAGTTGTTGTTTAGGATCACTGGCCCAAAGAGTGGAGTTTCTTACCTGTGCCTGTGAC 32273 || || || || ||||| || ||||| || || ||||| | |||||||||||||| Sbjct 168259 GCCAGCTGCTGACGCGGATCGCTCGCCCAGAGTGTTGAGTTCCGCACCTGTGCCTGTGAG 168318 Query 32274 AGTAGCAATTCCAGGACACGTGGTTTATCTTCACCCTTCATCGTGGCCCATACACGCACT 32333 || |||| |||||| || || || | | || |||||| || ||||| || || || Sbjct 168319 AGCAGCAGTTCCAGCACCCGCGGCTCCTGCTCGTTCTTCATTGTTGCCCACACCCGAACA 168378 Query 32334 CCACAACCTGCTTCATCTTTTAATGTCCATGCTGGAGCGATGTAGGTATTACCCTTCTGG 32393 || || || | |||||| | | |||||| | || |||||||| |||| || || Sbjct 168379 CCGCATCCGGATTCATCCTGCAGTGTCCAGTCCGGTGCGATGTATTTATTGCCTTTGGAT 168438 Query 32394 GATGTTTTCTCTACAAACTTGCCGATCACGTTTTCCCACGGTCCGAACCACTCATAGTTG 32453 || |||||||| || ||||||| || |||||||| || || ||||| || || | | Sbjct 168439 GAGGTTTTCTCGGTGAATCTGCCGATAACATTTTCCCATGGCCCAAACCATTCGTAATGG 168498 Query 32454 ATACGGTCTTTCGTTGGCGACATCGTGGTGATCACCGCATTTACCAACTGGGCCTCATAA 32513 | || || | || | ||| ||| ||||||| ||||| |||| ||| ||||| || Sbjct 168499 AGCCGATCCCGTGCCGGGGCCATGGTGTTGATCACTGCATTCACCAGCTGTGCCTCGTAT 168558 Query 32514 CCGAGAGTGCCGCTAACGACATGA--GTTTTCTGCGCGACTGCGAATGGATTCATACCCC 32571 || ||| ||| | ||| ||| ||||| || ||||| || || |||||||||| || Sbjct 168559 CCCAGAACACCGTTGACG--GTGAAGGTTTTTTGGGCGACGGCAAACGGATTCATACGCC 168616 Query 32572 ACTGAGCAGCCTGCATTGCCACAGCCATGCAATCAGCAGGCTTT-CCGGCGAGGTGAGCC 32630 |||| |||||||| | |||||||| || || || |||||| || ||||| || ||| Sbjct 168617 ACTGCAGGGCCTGCATGGTCACAGCCAGACAGTCTGC-GGCTTTGCCCGCGAGATGCGCC 168675 Query 32631 GGTACGGTCACGCGACTTTGAGACATGACCTCGGCAAACTTCATCAACTGGTTCAACCCT 32690 || || || || | || | ||||| || ||||| || || | | || | Sbjct 168676 GGGACAGTGACTCTGCTGCTGGCCATGATTTCTGCAAAGCGCACCAGTTTATCCAGGGCA 168735 Query 32691 TCAGGGCTAAAAATGGTGGCAGCGGTGCCAGCTATGGCAGTGTCTACTGGTTGGTTAAT- 32749 || ||||| ||||| ||||||| ||| ||| || |||| | | | || Sbjct 168736 TCGGGGCTGAAAATAGTGGCAGTTGTGTCAG---TG---CTGTCGGGCGCAGAGATCATC 168789 Query 32750 GGTTGAGATTTCGTTGCTCATACGTACATATCCTGTTTGCGTGCCCACTCAGGGCGTTTA 32809 |||||| || | | | | ||| ||||||| ||||||| | ||||| | | Sbjct 168790 GGTTGATTTTGCATAACGCCTAC-------TCCTGTTAATGTGCCCATGCGGGGCGCTGA 168842 Query 32810 ATAATTTCCACACCACCCCATTCATCGCTGATGCGGCATTCGTGATAGGTATTCAGATCC 32869 || ||||| | || ||||| | || || || ||| || || | || ||| ||| Sbjct 168843 ATTATTTCTATGCCGCCCCAGTTATTGCCGAGGCGACAGGAATGGAAAGTGCACAGGTCC 168902 Query 32870 CGGCGGAATAACTGGTGTCCGGCGTCAACATCAGGTGCATCAAGTTCGAACACGCGGACC 32929 || ||||| | | ||| ||| | ||| | | || || ||||| || ||| Sbjct 168903 CGACGGAAGAGGGCGGATCCCGCGCTCATGTCATTGTCGTGCAGCTCAAACACACGAACC 168962 Query 32930 GGGTATCGACCGCAGTCGATGGTTTCGCTGACAGCCAGGAAGAAGAAACCATGCGG---T 32986 || || || || |||||||| | ||| ||||| || | || | ||| ||||| | Sbjct 168963 GGATAACGGCCACAGTCGATCGCTTCACTGACCGCAATAAAAACGAA---CTGCGGATAT 169019 Query 32987 TGGCCAGTAACCTTCAGCGCGCCTTCGCGGTACATGGCGTCCTGGACGTGATAACGGAAC 33046 |||||| | ||| |||| ||||||||| |||| ||||| || |||||| Sbjct 169020 GTGCCAGTGCAGTGATAAAAGCCCTCGCAGTACATGGCTGCCTGAACGTGGTACCGGAAC 169079 Query 33047 TCCTCGATGTGACGTGCGAAGCGATCCATGTCGGCAACCTTTTTCACATCAACGATCACG 33106 | |||||||| || || ||||| ||| || ||||||||||| || ||||| | Sbjct 169080 GCTTCGATGTGGCGGGCAAAGCGCGACATATCACTCACCTTTTTCACGTCGACGATGAGA 169139 Query 33107 TTGTGCTCATTCAGCCATTTGTCAGGACGGATTCGGCACAGTTCGCCAGTCTCTTCATCG 33166 | | | |||| |||| || || ||||| || || ||||| | |||||| |||| Sbjct 169140 GGGCGATTCGTCAGATATTTATCTGGCCGGATGCGACAGAGTTCTTCTGTCTCTGCATCT 169199 Query 33167 TTCCAGTACATTGACGCTTCACAGTGGCCTGGCGCCTCCAGCATCCAGCGCGCAGCCGGG 33226 |||||| | || | ||| |||||||| || || || | |||| || || | Sbjct 169200 GACCAGTAGAGGGAGGATTCGCAGTGGCCGTCAGCTTCAAGAAAAAAGCGTGCGGCGTGA 169259 Query 33227 TGGGCCATTGCGCTGTCGCGCATCAGTTTCAGTTTCCGGCCCTGTTCGGCGTCCATTACC 33286 || |||||| |||| || | ||| || | ||||||||||||||||| || ||||| ||| Sbjct 169260 TGCGCCATTACGCTCTCTCTCATGAGCTGAAGTTTCCGGCCCTGTTCTGCATCCATGACC 169319 Query 33287 GTCA---TACCCATACCGGCAACATCGCGCAGGAACGCTTCTTCGTCTGCTTTACCCTGG 33343 |||| | | || | | ||| ||| || ||| ||||||||||||||||||| Sbjct 169320 GTCATGTTCCGGATGCGTGTCTCAT---TCAGAAATGCTGCTTCGTCTGCTTTACCCTGA 169376 Query 33344 TTGGTGCGGCGGTTGAACTGTGGCGCCACGATGAAACGTTTATCGAATTCATCCGGCTCC 33403 |||||| ||||| || || ||||| || || || ||||| || | || ||||| Sbjct 169377 GAGGTGCGCCGGTTAAAAGAAGGAGCCACAATAAAGCGCTTATCAAACTGTTCAGGCTCA 169436 Query 33404 AGTAGCAGGCAGTGCAGAGCGGTACCCATGTCCAGTGCCGATTTTTTCTCTTCATCTTCC 33463 || |||| ||||||||| ||| | ||||| |||||||| | | |||| || ||| | Sbjct 169437 AGCAGCATGCAGTGCAGCGCGCTTCCCATATCCAGTGCGGCTGTTTTATCCGTATCCACA 169496 Query 33464 GGCGCAGCCTTCACCCATTTCAGAAGAGCAGGGTTCTTTGCCACCATATCCAGCTGCGAC 33523 |||||| || ||| || || ||||| || | ||| |||||||| Sbjct 169497 GGCGCATGTTTGCGCCAGAGGTAAATGGCCGGGTTAACCGCAATGTCATCGAGCTGCGAT 169556 Query 33524 TTACTCACGCCGTCACCGGCGTGGTAGTCCTCATTGCTGATGTCGAAATAGGTTCCTGGG 33583 ||||| |||||| ||||||||| ||| |||||||||||| | | |||| | || || Sbjct 169557 TTACTGACGCCGGGACCGGCGTGATAGGCCTCATTGCTGAGGCCTTCATAGATACCCGGT 169616 Query 33584 TTCAT 33588 ||||| Sbjct 169617 TTCAT 169621 >seq174 Length=42168 Score = 176 bits (194), Expect = 1e-39 Identities = 154/192 (80%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 41418 TGATGGCTAAATCCCCAGCAGAACGCAAAGCCGCGCAGCGCGCGCGGCAGTCCGCCGCCG 41477 ||||| |||||||||| ||||||||||||||||||||||| || | ||| |||| |||| Sbjct 40197 TGATGCCTAAATCCCCCGCAGAACGCAAAGCCGCGCAGCGTGCCAGACAGGCCGCTGCCG 40256 Query 41478 GTGAGCGCAAGCTTGAACTGGTGCTGGATGCTCAGGAACTGGACATGCTGGCGCGGAACT 41537 ||| ||||| || |||| ||||||| |||||||||||| |||||||||| ||||| Sbjct 40257 GTGGCAAAAAGCTGGAGCTGGCGCTGGATAGTCAGGAACTGGAGATGCTGGCGCAGAACT 40316 Query 41538 GCGCCGCCCGGCGCCCTGGGCGTGCGCCGTATGAAATGTCTGAGTACATCGCGATGCTGA 41597 ||||||| || ||||| || |||| |||||||| || |||||||| ||| || | | Sbjct 40317 GCGCCGCACGCCGCCCCGGTCGTGAACCGTATGAGCTGAACGAGTACATAGCGCTGTTAA 40376 Query 41598 TTCGCCAGGATG 41609 | || |||||| Sbjct 40377 TCCGAAAGGATG 40388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133500302358116