Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031128.1 Length=158081 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=970878 Score = 91.5 bits (100), Expect = 1e-13 Identities = 284/434 (65%), Gaps = 12/434 (3%) Strand=Plus/Plus Query 17228 TTCACCAGGCGCTCGAACATGACGCGGTTAATCTGAATCCCATAGTCGATACGGCGTTCA 17287 |||| |||||||| |||| | ||| | ||| | |||||||| || | || | Sbjct 158246 TTCAGCAGGCGCTGATACATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACG 158305 Query 17288 CGGTTCTCTTCCAATCCACGGTTGTTTTTGAGAACAACGACATCATCAAATTGATAATGC 17347 ||||| |||| | ||||||||||| || || || | | || | || |||| Sbjct 158306 CGGTTGCCTTCAACACCACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGC 158365 Query 17348 CAGATGGG--AACATAGCATGTTGCCGATCCACCACGGATACCGCCTTGAGAGCAAGACT 17405 || || || | | ||| || || | || ||||| | ||||| ||||| || |||| Sbjct 158366 CACATCGGGTAGAACAGCGTG--GCTGCGCCGCCACGAACGCCGCCCTGAGAACAGGACT 158423 Query 17406 TCAGGGCACCAGTC---AAATACTTGATGAATGGAAC-CAGACCTGTATGGACCATTTCC 17461 ||| || ||| |||| |||| ||| || | ||| || ||||||| | ||| Sbjct 158424 TCACCGCG---GTCTGGAAATGCTTGTAGAACGGGATACAG-CCGGTATGGAACGCTTCA 158479 Query 17462 CCTTTACGGATAGGGCTACCGATGCCACGAATTGCCCCAACATCGAATCCGATGCCAGCA 17521 || || || ||||| || | |||| || || | | || |||||||| ||| Sbjct 158480 CCGCCGCGAATCGGGCTGCCCAGCGCACGGATACGACCGGCGTTGATACCGATGCCGGCA 158539 Query 17522 CGTTTGGAAACATAATCCACGATGCTTTTCGCAGTGGCATTAATTGAGTCCAATGTATCA 17581 || | || ||||| | ||| || | | ||||| || || ||||||| | || Sbjct 158540 CGCTGAGAGACATATTTCACAATTGCGCTGGAGGTGGCGTTGATGGAGTCCAGGCTGTCG 158599 Query 17582 CCAGTTTTGATTAATACACAAGAGCTGAACTGTCGGGTCGGGGTGCGGACGCCGGACATA 17641 || | ||| | ||||| ||||||||||| || || |||||||| ||||| ||||| Sbjct 158600 CCGCACTCGATCAGCACACAGGAGCTGAACTGACGTGTTGGGGTGCGTACGCCAGACATG 158659 Query 17642 ATAGGTGTTGGAAG 17655 || || || || || Sbjct 158660 ATTGGCGTCGGCAG 158673 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 102158 TGTAGTTCAGTCGGTAGAACGGCGGTCTGTTAAACCGTATGTCGCAGGTTCAAGTCCTGC 102217 ||||||||||||||||||||||||| ||||||| ||||||||| | ||||| ||||| | Sbjct 378785 TGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCAGT 378726 Query 102218 CATCGTCGCCAAAT 102231 || | ||||||| Sbjct 378725 CAGAGGAGCCAAAT 378712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505690937474840