Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq4 174 6e-39 >seq4 Length=447486 Score = 174 bits (192), Expect = 6e-39 Identities = 360/531 (68%), Gaps = 10/531 (2%) Strand=Plus/Minus Query 51810 GGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTCGGGGAGTTGCTG 51869 || || ||||| ||||||||||||| ||| ||| || | | ||| ||||| Sbjct 112119 GGTTTTCCGCTGGTCACCACCAAGAAATGTCATATCCGCTCGATTATTCATGAGCTGCTG 112060 Query 51870 TGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGCGTCAGCATTTGG 51929 ||||| || ||| ||| ||| || ||||| | | || |||| ||| ||| Sbjct 112059 TGGTTTCTGAAAGGCGATACCAACATCGGTTATCTCAAAGAAAACAACGTCTCCATCTGG 112000 Query 51930 GACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAGTGGCGTAGT 51989 || || ||||||||||| ||||| | || || || |||||||| || |||||||| || Sbjct 111999 GATGAGTGGGCGGATGAGAATGGCGATCTCGGCCCGGTGTATGGCAAACAGTGGCGCAGC 111940 Query 51990 TGGGATGCTGGTGGCGGCAAGGTCATCGATCAGAT---CCATGAAGTCGTCAAATCAATT 52046 |||| | | ||||| ||| || || ||| | ||| | | | | || | Sbjct 111939 TGGGGAACGGCCAGCGGCCAGGAGATTGACCAGTTAAGCCAGGTGATGG----AGCAGCT 111884 Query 52047 -AAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGTGATTTGGA 52105 ||| |||||| || || ||| || || ||||| ||||| || || || || Sbjct 111883 GAAGCGCGATCCCGACTCACGCCGGATTATCGTTTCTGCCTGGAACGTCGGCGAGCTGAG 111824 Query 52106 TGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAAGGTAAGCT 52165 || |||||| ||||||| ||||| | | ||||| ||||| || || || || || || Sbjct 111823 CGAGATGGCGCTGGCTCCTTGCCACGCGTTCTTCCAGTTCTACGTGGCGGACGGCAAACT 111764 Query 52166 TTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGC 52225 || ||||| | |||||||| || |||||| ||| ||||| | ||||||||||| || Sbjct 111763 CTCCTGCCAGCTCTATCAGCGCTCGTGCGACATCTTCCTGGGCCTGCCGTTTAACATCGC 111704 Query 52226 CAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCTTGATGTTGGTGAAT 52284 ||||||| | |||||| ||| || | || | |||||| | || | || || || | Sbjct 111703 CAGCTATGCGTTGCTGGTACATATGGTGGCGC-AGCAGTGCGATCTGCAGGTGGGCGACT 111645 Query 52285 TCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAGATCAGG 52335 || | ||||| || || || ||| |||||| |||||| | || |||| Sbjct 111644 TCGTCTGGACCGGCGGTGATACCCACCTCTACAGTAACCATCTGGAGCAGG 111594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190081622683090