Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010545.1_202016-07-09] 6,369 sequences; 30,522,918 total letters Query= NC_031934.1 Length=168929 Score E Sequences producing significant alignments: (Bits) Value seq1 158 1e-33 >seq1 Length=970878 Score = 158 bits (174), Expect = 1e-33 Identities = 283/411 (69%), Gaps = 2/411 (0%) Strand=Plus/Plus Query 142448 CATCAGGTCGTTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCGACACC 142507 |||||| | ||| | ||| | || |||||||| ||||| | ||||| | || ||||| Sbjct 158263 CATCAGCTTGTTGAGCTGTACACCATAGTCCATGTGACGCACGCGGTTGCCTTCAACACC 158322 Query 142508 CTTGTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATA-AG 142566 |||||| ||||| || ||||| |||| | ||||| |||||| || || || | || Sbjct 158323 ACGGTTGTTCTTCAGCACCAGCAGGCTTTCGATTTCCAGATGCCACATCGGGTAGAACAG 158382 Query 142567 CAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAAT 142626 | || || ||||||||||| | || || || ||||| || || || || |||||||||| Sbjct 158383 C-GTGGCTGCGCCGCCACGAACGCCGCCCTGAGAACAGGACTTCACCGCGGTCTGGAAAT 158441 Query 142627 GTTTCCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTT 142686 | || |||| || ||| |||||||| |||| || || ||| | || Sbjct 158442 GCTTGTAGAACGGGATACAGCCGGTATGGAACGCTTCACCGCCGCGAATCGGGCTGCCCA 158501 Query 142687 CAGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTA 142746 ||||| || ||| |||||||||| || || ||||| | ||| | |||| | | Sbjct 158502 GCGCACGGATACGACCGGCGTTGATACCGATGCCGGCACGCTGAGAGACATATTTCACAA 158561 Query 142747 TTGAGTTAGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCGGCTTCAATAACCACACAAG 142806 ||| | | | || ||| || || | ||| ||||||| || || | |||||| | Sbjct 158562 TTGCGCTGGAGGTGGCGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGCACACAGG 158621 Query 142807 AACTAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTAGGCA 142857 | || || ||||| ||||| || ||| | |||| ||| || || || |||| Sbjct 158622 AGCTGAACTGACGTGTTGGGGTGCGTACGCCAGACATGATTGGCGTCGGCA 158672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540401773838360