Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010705.1_202016-07-08] 5,029 sequences; 28,124,222 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq159 96.9 4e-15 >seq159 Length=47163 Score = 96.9 bits (106), Expect = 4e-15 Identities = 185/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 145998 CTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGT 146056 ||| || || || | |||| | ||||| ||||| |||| ||| | || ||||| | Sbjct 25791 CTGATCGACCCCTTTCCCCTGATAATCATCCTTGGCCGTCCTA-TACTCTGCGCCGAAAT 25849 Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGG 146116 |||||||||||||||| || || || ||||| ||||| ||||| || |||| ||| Sbjct 25850 GCCTCCACTGGAACCCATAAACCGGTCCCAGATCCCCCTCTTCCCTATGACCCAACCCAA 25909 Query 146117 CCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGA 146176 || | || || | | || || || | ||||| || ||||| ||| | |||| | Sbjct 25910 CCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCCTTGTCGGACA 25969 Query 146177 GCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCC 146236 || || || || || || | | |||||| ||||| || || | || || | | Sbjct 25970 ATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCAATGATACCTCGCG 26029 Query 146237 AGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||| |||||||||||| ||||||| Sbjct 26030 TAAAGACCTTCTTGGTGGTCAAAAGGGGGA 26059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590039706297160