Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010705.1_202016-07-08] 5,029 sequences; 28,124,222 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq21 387 2e-102 seq14 170 2e-37 seq113 161 1e-34 seq233 105 8e-18 >seq21 Length=146172 Score = 387 bits (428), Expect = 2e-102 Identities = 580/824 (70%), Gaps = 0/824 (0%) Strand=Plus/Plus Query 7010 TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTA 7069 ||||| || | ||||||||| ||||| | || ||||| || || |||||||||||||| Sbjct 23661 TCACCGGTGAGGATGGCGGCCTGGACAGCGGCACCGTAGGCAACGGCCTCATCGGGGTTG 23720 Query 7070 ATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGG 7129 || | || || | || || ||||| || || ||||| | | || || | ||||| Sbjct 23721 ATGGACTTGTTAGGCTCCTTGCCGTTGAAGTAGTCCGAGACGAGTTTCTGGACCTTCGGA 23780 Query 7130 ATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAG 7189 || || || || ||||| || | ||||| || | || | || |||||||| ||| Sbjct 23781 ATACGAGTGGAGCCACCAACGAGGACGATCTCGTGGACGGAAGCCTTGTCGATCTTGGAG 23840 Query 7190 TCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCC 7249 || ||||| || ||||| |||||||| |||||||||||| |||| ||| Sbjct 23841 TCGCGAAGGACCTTCTCGACGGGTTCCATGGTGCCACGGAACAAGTCTTGGCACAACTCC 23900 Query 7250 TCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATT 7309 || || || ||||| || ||||| || ||||| || | || ||| | | ||| || || Sbjct 23901 TCGAAGCGAGCACGAGTGATGGAGGTGTAGAAGTCGATACCCTCGAAGAGCGAGTCGATC 23960 Query 7310 TCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGT 7369 || ||||| || || || | |||||| | |||||||| || ||||| || || || || Sbjct 23961 TCGATGGTAGTCTGCGCGGCCGAAGAGAGGGTTCGCTTGGCACGCTCGCAGGCAGTGCGG 24020 Query 7370 AAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCT 7429 | |||||| || ||||| | ||| || | ||| ||||| | || || || ||||| Sbjct 24021 AGACGACGGAGAGCACGGGCGTTGGACGAGAGATCCTTCTTGTTCTTGCGCTTGAACTCG 24080 Query 7430 TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCC 7489 | |||||| | ||||| ||||| || ||||| |||||||| || || || Sbjct 24081 GCGACGAAGTGAGTGACGAGTCGGTTGTCGAAGTCCTCACCTCCCAAGTGGGTGTCACCG 24140 Query 7490 GCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTA 7549 ||||| || ||||| || |||||||| | |||||| | || | || ||||| ||||| Sbjct 24141 GCGGTGGCCTTGACCTCGAAGATACCCTCCTCAATGGTCAAAAGGGAGACATCGAACGTT 24200 Query 7550 CCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCG 7609 || || || || ||||| ||||| |||||| | ||| || | | ||||| ||||| ||| Sbjct 24201 CCTCCTCCGAGATCAAAGATGAGGACGTTCTTCTCGCCGACGGTCTTCTTGTCGAGGCCG 24260 Query 7610 TACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATA 7669 || ||||| || || || || || || ||||||||||| || ||| ||||| | || Sbjct 24261 TAAGCGATGGCGGCGGCGGTGGGCTCGTTAATAATACGGAGGACGTTGAGGCCCGAGATG 24320 Query 7670 GTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACG 7729 | ||||| || || |||||||| ||||| ||||| |||||||| ||||| || ||| Sbjct 24321 ACACCGGCATCCTTGGTGGCTTGTCGCTGCGAGTCGTTGAAGTAGGCGGGGACAGTGACG 24380 Query 7730 ACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGA 7789 || |||| | ||| || | ||||| || | || ||| | || ||||| || || Sbjct 24381 ACGGCGTTGGAGACGGTCGTGCCGAGGTAGGCCTCAGCGGTCTCCTTCATCTTCAGCAGG 24440 Query 7790 ACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 | ||| ||||| || || || | | ||||| || || || || Sbjct 24441 ATCATGGATGAGATTTCCTCGGGGGTGAACTGCTTGGTCTCGCC 24484 >seq14 Length=155459 Score = 170 bits (188), Expect = 2e-37 Identities = 524/807 (65%), Gaps = 15/807 (2%) Strand=Plus/Plus Query 7012 ACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAAT 7071 ||| || |||| |||||| || || | || ||||| || || |||||||||||||| || Sbjct 85636 ACCGGTCAAGACGGCGGCCTGAACGGCGGCACCGTAGGCAACGGCCTCATCGGGGTTGAT 85695 Query 7072 CGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGAT 7131 || || |||| | | || || | || || | | || || || ||||| Sbjct 85696 CGACTTGTTCAACTGTCGGCCACCGAAGAACTCGGAAACGAGCGACTGGATCTTGGGGAT 85755 Query 7132 TCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC 7191 || ||||| |||||||| | ||||| || | || || | |||| ||| | ||| Sbjct 85756 ACGGGTCGAGCCACCGACGAGGACGATGTCGTCGACCTTGGTGCGGTCGACCTTGGCGTC 85815 Query 7192 TCGAAGTGTTTTTTCGACAGGTTCCATACATTTA-CGGAACAAGTCCATACACAGTTCCT 7250 | || || ||||| || || | | | | ||||| | | | |||| Sbjct 85816 TTTGAGGACCTTCTCGACGGGGTCGAG-CGTGGAGCGGAAGGTGGCGGCGTTGATCTCCT 85874 Query 7251 CAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTT 7310 | ||||| ||||||| || || | |||| || || | | | | ||| || | | Sbjct 85875 CGAAACGAGCACGGGAGATCGAGGCGGAGAAGTCGGTACCTTGGAAGAGCGAGTCGACCT 85934 Query 7311 CAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTA 7370 | | ||| || || | || || | || ||||| || ||||| ||||| | ||| | Sbjct 85935 CGACGGTCGTCTGCGTAACGGACGAAAGGGTGCGCTTGGCACGCTCGCACGCGGATCGGA 85994 Query 7371 AACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTT 7430 |||||| ||||||||||||| |||| || || ||| | || | | |||||| | Sbjct 85995 GACGACGGAGGGCACGCGGGTCCTCGGAGATGTCGAGCTTGTTCTTCCTCTCAAACTCCT 86054 Query 7431 CAGAGAAGTGT--CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCC 7488 |||||| | || | | | | || || || |||||||||||||| || || || Sbjct 86055 TCTTGAAGTGCTCCAAAAGGGCGTTG--TCAAAGTCCTCACCACCCAAGTGGGTGTCACC 86112 Query 7489 CGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGT 7548 ||||| || ||||| | |||| ||| || ||| | || | ||| ||||| || || Sbjct 86113 AGCGGTGGCCTTGACGGCGAAGACACCACCCGAGATGGTCAAGAGCGAGACATCGAAAGT 86172 Query 7549 ACCACCACCCAGGTCAAAAATGAGTACG---------TTCGTATCGTCGTCTTTGTTCTT 7599 || || || || || || ||||| ||| ||| || | || || || Sbjct 86173 TCCTCCTCCAAGATCGAAGATGAGAACGAGCTTCTCCTTCTTAGACTTCTCGGTGGCCTC 86232 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 | | |||||||| ||||| || || || || || || || || ||||| || || || Sbjct 86233 ACCCAGACCGTAGGCGATGGCAGCGGCGGTGGGCTCGTTGATGATACGGAGCACGTCCAA 86292 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 || || || ||| | || || || |||| | || ||||| ||||| ||||| || || Sbjct 86293 ACCGGCGATCGTTCCGGCGTCCTTGGTCGAGAGACGCTGCGAGTCGTTGAAGTAAGCGGG 86352 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || ||||| || | | |||| | ||| ||||| | | || ||| | || || | Sbjct 86353 GACGGTGACGACGGCCTTCTTGACCTCCTTGCCGAGTTTGGTCTCGGCGGTCTCCTTGAG 86412 Query 7780 TTTGGTAAGAACCATCGATGAAATCTC 7806 |||| ||| ||||| || || ||||| Sbjct 86413 CTTGGAAAGGACCATGGACGAGATCTC 86439 Score = 104 bits (114), Expect = 3e-17 Identities = 115/153 (75%), Gaps = 3/153 (2%) Strand=Plus/Plus Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 ||| |||| ||| || || ||||| || | | | || || ||||| || || ||||| Sbjct 86693 CTTGGCCGAGTCACCAATGAGACGCTCGGTCT---CGGTGAAGGCGACATAAGAAGGGGT 86749 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || || || || |||||||| || || || || || ||||||||||||||||| ||||| Sbjct 86750 GGTGCGGTTACCCTGGTCGTTGGCGATGATCTCGACTCGGTCGTTTTGCCAGACACCGAC 86809 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGAT 8145 ||| || || || ||||| | ||| ||||| || Sbjct 86810 GCAGGAGTAGGTGGTTCCGAGATCGATACCTAT 86842 >seq113 Length=63474 Score = 161 bits (178), Expect = 1e-34 Identities = 248/353 (70%), Gaps = 3/353 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || ||||| || ||| ||||||| ||| Sbjct 41867 TCGAAGTCCTCACCACCCAAGTGGGTGTCACCGGCGGTGGCCAAGACCTCAAAGACACCG 41808 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 |||| || | | ||| ||||| ||||| || || || || || | | || | | Sbjct 41807 TCTTCGATCGAGAGGAGCGAGACATCGAACGTTCCTCCTCCGAGATCGTAGACGATGATG 41748 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | | | |||| ||||||||||| ||||| || || || || || || Sbjct 41747 TTGCGCTCGCCACC---GGTCTTGTCGAGACCGTAGGCGATCGCGGCGGCAGTGGGCTCG 41691 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || | || || ||| |||||| || || || || | || || || |||||||||||| Sbjct 41690 TTGACAACTCGGAGAACGTTCAGACCGGCGATCGTGCCAGCGTCCTTGGTCGCTTGTCGT 41631 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || | ||||| |||||||||||||| || ||||| |||| ||||| ||||| || | Sbjct 41630 TGAGCGTCGTTGAAGTAGGCCGGGACGGTGACGACGGCGTGGGTGACCTTCTTGCCCAAG 41571 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || | || ||| | || ||||| ||| | || ||| | || ||||| || Sbjct 41570 TAGGCCTCGGCGGTCTCCTTCATCTTGCCCAAAATCATGGCCGAGATCTCCTC 41518 >seq233 Length=32001 Score = 105 bits (116), Expect = 8e-18 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 |||||||||||||||| || || || || || || ||||| | ||| || || || Sbjct 14637 TCGAGACCGTACGCGAGGGCAGCGGCGGTGGGCTCGTTAATGACACGGAGCACGTCAAGA 14578 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 || || || || | || || || ||||| ||||| ||||| ||||| |||||||| ||| Sbjct 14577 CCCGCGATCGTACCGGCGTCCTTGGTCGCCTGTCGCTGCGAGTCGTTGAAGTAGGCGGGG 14518 Query 7721 ACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATT 7780 || || ||||| |||| | |||| ||| ||||| || || ||| | || ||||| Sbjct 14517 ACAGTGACGACGGCGTGCTTGACCGGCTTTCCGAGGTAGCCCTCGGCGGTCTCCTTCATC 14458 Query 7781 TTG 7783 ||| Sbjct 14457 TTG 14455 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635092873964360