Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010705.1_202016-07-08] 5,029 sequences; 28,124,222 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq154 127 2e-24 seq68 125 6e-24 seq95 116 3e-21 seq3228 113 4e-20 seq10 113 4e-20 seq1 95.1 1e-14 >seq154 Length=48613 Score = 127 bits (140), Expect = 2e-24 Identities = 166/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||| |||||| | || || || || || || || || || ||||| || || | ||| Sbjct 44546 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 44605 Query 24765 ACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | || |||| || || || |||||||||||| ||||| || || || || || Sbjct 44606 ACACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAG 44664 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||||||||| || ||||| |||||| | | | || | || || ||| Sbjct 44665 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 44724 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| ||||| || |||||||| | || |||| || || Sbjct 44725 ATCCAAAAGGAGTCGACCCTCCACTTGGTCCTCCGCCTGCGTGGTGG 44771 >seq68 Length=86121 Score = 125 bits (138), Expect = 6e-24 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| |||||| | || || || || || || || || || ||||| || || | |||| Sbjct 31019 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 30960 Query 24766 CACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 ||| | || |||| || || || |||||||||||| ||||| || || || || || | Sbjct 30959 CACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 30901 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 ||||| | ||||||||||| || ||||| |||||| | | | || | || || |||| Sbjct 30900 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 30841 Query 24885 TTCAAAAGGAATCGACACTACACTTGGT 24912 | |||||||| ||||| || |||||||| Sbjct 30840 TCCAAAAGGAGTCGACCCTCCACTTGGT 30813 >seq95 Length=70211 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| || || || || || |||||||| || || | | Sbjct 216 ATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 275 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || ||||| || ||||| ||||| || || || || || Sbjct 276 GACACGATCGACAACGTCAAGAC-CAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCA 334 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || |||||||| || || || ||||| |||||| | | | | ||||| || Sbjct 335 GCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACGCTCGCGGATTACAA 394 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| ||||| || ||||||||| |||| Sbjct 395 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCG 430 >seq3228 Length=310 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || || |||||||| || || || | Sbjct 94 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 153 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 154 GACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAG 213 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 214 CAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 273 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| ||||| || ||||||||| Sbjct 274 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 303 >seq10 Length=176449 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || || |||||||| || || || | Sbjct 13773 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 13714 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 13713 GACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAG 13654 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 13653 CAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 13594 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| ||||| || ||||||||| Sbjct 13593 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 13564 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || ||||||||||| || || || | Sbjct 14229 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATTACGCTCGAGGTCGAGTCCTCG 14170 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 14169 GACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAG 14110 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 14109 CAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 14050 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| ||||| || ||||||||| Sbjct 14049 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 14020 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| ||||| | || || || ||||| || || || |||||||| || || || | Sbjct 14458 GATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCCTC 14399 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 14398 GGACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCA 14339 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 14338 GCAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 14279 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 || || ||||| ||||| || |||||||| Sbjct 14278 TATCCAGAAGGAGTCGACGCTGCACTTGGT 14249 >seq1 Length=262052 Score = 95.1 bits (104), Expect = 1e-14 Identities = 791/1255 (63%), Gaps = 84/1255 (7%) Strand=Plus/Plus Query 138789 CGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC 138848 || ||||| ||| | | ||| || || ||| || |||| |||||| || ||||| Sbjct 257564 CGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTACGCGCCTC 257623 Query 138849 GGCGCTCTCGTACGGCAT-GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCA 138907 || ||| ||||||| || || | ||||||||||||| || |||||||| || | Sbjct 257624 GGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCGAGACCTTGCACTCCGA 257682 Query 138908 CTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGATA---GGATAATAGT 138964 |||| ||||| ||||| | || || ||||||| || |||| ||||| |||| Sbjct 257683 TGCCGATGGGGCGGTGGCGGAAGTTGGAG--TTTTGCGCCT-CGATGACGGGATAGTAGT 257739 Query 138965 TTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT- 139023 | || |||||||| ||| || || |||| ||||| | || | | | | | Sbjct 257740 TGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTT-GACGACCTCGTGCAACTTC 257798 Query 139024 TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACG-TCGACAAATTTGTTGACACAAAT 139082 | ||| ||||| ||| ||| | || || | ||| ||| | | | | Sbjct 257799 TTAAAGTCGTACACGCC------GTCCTTGATGAAGCTCGGCAA---------CGCGA-T 257842 Query 139083 CGAGGCTATGTTGCACACCGC-CACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCAC 139141 |||||| | |||||| || || |||| |||| || | ||| |||| || |||| | Sbjct 257843 CGAGGCCAAGTTGCAGACGGCGCACT-CGTCCGGCGCCGAGTACTCGATGATCTCGGTGC 257901 Query 139142 ACAAATTACTAC-ACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCA 139200 ||| || | || |||||||||| || | ||| | ||| || ||| ||| || Sbjct 257902 ACAGGTT-CGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGCG 257960 Query 139201 TCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAAC 139260 |||||||| |||||| | || |||||||||| || || | || | ||| | | | Sbjct 257961 TCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGT--ACC 258018 Query 139261 AAGTCCCTAGCTTGTATTTGACGCACGTAAAGTT--CGTCGCGC-----------TCGTA 139307 || ||||| ||| ||| | | ||| | | |||| ||||| Sbjct 258019 AA------AGCTT----TTG-CGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTA 258067 Query 139308 CTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTC 139367 || ||| | | || ||| || || ||| | || || || | | | | Sbjct 258068 TTTCTCGAACAAGGCGCGGAACTCCTCGCCATAGACTTCGTGTAGGCCGGGGGCTTCGGC 258127 Query 139368 AGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAAT 139427 || || | ||| | ||| ||||| |||| ||| ||| |||||| ||||| ||||| Sbjct 258128 GGGGCAGAAGAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAAT 258187 Query 139428 CCACAAAGCGAACAGCAAATCGCG--CGCCTTCTTATCTTCCGAACCCATGTTACGTTTC 139485 ||| | || || | | ||| || ||| ||| | ||| || ||| || | Sbjct 258188 CCAGAGCGCAAAGAAGAGATCACGAGCGCGAACTT--CCTCCTTGCCGTGGTTC--TTGC 258243 Query 139486 --ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGC 139543 | || ||||| || || ||||| |||||||| || || || ||||| || | || | Sbjct 258244 GAAGGTCCAGGAATTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTC 258303 Query 139544 CTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACA 139600 | || ||| |||||||| ||||||| || | | || ||| | || || | || Sbjct 258304 CGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCA 258363 Query 139601 TCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCGAGCT 139656 | || | | ||| ||| ||||| |||| |||| ||| | || ||| Sbjct 258364 TGGGGACAATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCG---- 258419 Query 139657 CGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCG 139716 |||| || || | | | ||||| || ||| | ||||| || | |||| || Sbjct 258420 CGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCA--CG 258477 Query 139717 -CGTAAT-GTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATG 139774 | ||| || ||||| || ||| || || |||| |||||||||||| || || | Sbjct 258478 TCTTAAGCGTGTCGTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGG 258537 Query 139775 ACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACA 139834 ||||||| ||||| | ||| ||||| || || || || ||||| || || Sbjct 258538 ACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGT 258597 Query 139835 TTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATAC 139894 | | ||||| | | ||||| | | | ||| | |||| || |||||||| | Sbjct 258598 AGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGC 258657 Query 139895 CGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttt 139954 |||| | ||| ||||| ||||| ||||| |||||||| ||| ||| ||||| Sbjct 258658 CGACGGCGACACGCATGAGCATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAA 258717 Query 139955 tCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATCG 140007 || || | ||| || || || ||| |||||||||| | ||| ||||||| Sbjct 258718 GCAAGTAGGAGCGT--TCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCG 258770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449869318312120