Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010705.1_202016-07-08] 5,029 sequences; 28,124,222 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq159 147 2e-30 >seq159 Length=47163 Score = 147 bits (162), Expect = 2e-30 Identities = 198/273 (73%), Gaps = 6/273 (2%) Strand=Plus/Plus Query 27453 CAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTG---TACTCTGCTCC 27509 || |||||| ||||| ||||| || || | ||| || |||| |||||||| || Sbjct 25788 CAACTGATCGACCCCTTTCCCCTGATAATC-ATCCT--TGGCCGTCCTATACTCTGCGCC 25844 Query 27510 GAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAA 27569 |||||||||||| |||||||| || ||||||||||| || ||||||||||| || | || Sbjct 25845 GAAATGCCTCCACTGGAACCCATAAACCGGTCCCAGATCCCCCTCTTCCCTATGACCCAA 25904 Query 27570 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 27629 || ||| |||| ||| | ||| || || || | ||||| || || |||||||| || Sbjct 25905 CCCAACCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCCTTGTC 25964 Query 27630 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGC 27689 ||| | ||| || | || || |||| |||||||| ||||| ||||| | || | Sbjct 25965 GGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCAATGATACC 26024 Query 27690 CTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | ||||||| ||||||| || | ||||| Sbjct 26025 TCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 26057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369484552557299