Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010715.1_202016-07-08] 5,717 sequences; 25,920,840 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq429 154 3e-32 >seq429 Length=14113 Score = 154 bits (170), Expect = 3e-32 Identities = 466/715 (65%), Gaps = 11/715 (2%) Strand=Plus/Minus Query 248758 GTCATTCAGGACAACGCGCACCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAG 248817 ||||| || |||||| ||| ||| || |||| | ||||| | ||||| | Sbjct 11255 GTCATCATGGCCAACGCCGACCGCCTCAACAGCGCCGTCATCTACGACCGCGATTTCGGC 11196 Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||||||||| || || || | || || || |||||| Sbjct 11195 TACAACTACTTTGGCTTCAAAACGCTCGAACGCTCCTACTTGCTTCGCATCGACGGCAAG 11136 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||| ||||| || |||||| | ||||| || || ||||| || ||| | ||| Sbjct 11135 GTCGCCGAACGCCCGCAACACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGAC 11076 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || ||| |||| | || |||||| | ||| || |||| | || || ||| | Sbjct 11075 ATTGAGCGCGTCTTGCAGTCGTACAACCTTATGTCCGAGCGCTACTTTACCCACGCCTCG 11016 Query 248998 CCGACGCTCTTCAACGCCGGTAC-CGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGC 249056 |||||||||||||||||||| || | || || ||||| || || || || | | Sbjct 11015 CCGACGCTCTTCAACGCCGGAACGCCTC-ACCCGCAGCTTTCGTCCTGTTTCCTGGTCAC 10957 Query 249057 CATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGACG---GCGAAGAT 249113 ||| | || || || | || |||||||| |||||||||| ||||| ||| || Sbjct 10956 GATGAAGGATGATTCGATTGAAGGCATTTACGACACGCTTA---AGACGTGCGCGCTCAT 10900 Query 249114 TTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTA 249173 || || ||| ||||| |||||| | | || ||||||||| |||| || || || Sbjct 10899 CTCCAAGACCGCCGGCGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCCTA 10840 Query 249174 CATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTC 249233 |||| || ||||| || | | || || || ||| | || || || | Sbjct 10839 CATCGCCGGCACAAACGGCTACTCGAACGGCATTGTCCCCATGCTCCGTGTCTACAACAA 10780 Query 249234 CACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTT 249290 |||||| | | | || |||| | || | || || | ||||| || || | Sbjct 10779 CACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCT 10720 Query 249291 GGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGA 249350 || |||||||||||| | || || ||||||||| | |||||| ||||||| || Sbjct 10719 CGAGCCGTGGCACGCCGACGTCTTCGAATTCCTGGACCTTCGCAAGAACCACGGCAAGGA 10660 Query 249351 GCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCG 249410 | | | || ||||| ||||||| | || ||| | |||| | |||||| || Sbjct 10659 GGAAGTTCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTTTTCATGGAGCG 10600 Query 249411 CGTCAAGGCCGACGGCGATTGGACGCTTCTTTCTCCGTCCGACGCCCCGGACCTC 249465 ||| |||||| |||||||||| | || | | || |||| ||||| | |||| Sbjct 10599 TGTCGAGGCCGCCGGCGATTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTC 10545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073687747617856