Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011025.1_202016-07-08] 4,724 sequences; 26,244,534 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2021 102 6e-17 >seq2021 Length=47197 Score = 102 bits (112), Expect = 6e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 97291 TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATC 97350 |||||||||| || | || ||||||||||| || || | || | || | | Sbjct 25708 TTCCAAGCACTCAAAATGATCCTTCTATCGGTGGGATTCTCCTTGATACTCTTGACAACT 25767 Query 97351 TGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAA--GACCTTGATATTCTG 97408 ||| | || ||||| || |||| || ||||| | ||| | ||| ||| |||| Sbjct 25768 TGCATCAACTGATCGACCCCTTTCCCCTGATAATCATCCTTGGCCGTCCT--ATACTCTG 25825 Query 97409 CTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCAC 97468 | || ||||||||||| ||||| |||||||| ||||| || || || ||||| |||| || Sbjct 25826 CGCCGAAATGCCTCCACTGGAACCCATAAACCGGTCCCAGATCCCCCTCTTCCCTATGAC 25885 Query 97469 AGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 || |||| |||||| | | | || |||||||| |||||||||| Sbjct 25886 CCAACCCAACCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAAT 25934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346764034344680