Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011025.1_202016-07-08] 4,724 sequences; 26,244,534 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2105 86.0 1e-11 >seq2105 Length=11779 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||| || || | || || | || || || || || || ||| Sbjct 11557 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 11616 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||| || || ||||| || || || || ||||||||||| || || Sbjct 11617 GCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTG 11676 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||||| | || ||||| || || || ||||| || || || || Sbjct 11677 ACATTGTCGATCGTATCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTC 11736 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 11737 TTGACGAAGATTTGCAT 11753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151328710172592