Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011025.1_202016-07-08] 4,724 sequences; 26,244,534 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2105 107 2e-18 seq4126 105 7e-18 seq1115 98.7 1e-15 seq1809 96.9 3e-15 seq3162 82.4 8e-11 >seq2105 Length=11779 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | || | |||||| || || || || |||||||| |||| ||||| | || Sbjct 11314 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCC 11373 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || | ||||||||||| |||||||| || || || ||| Sbjct 11374 TCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCT 11433 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || || || || || | || | ||| Sbjct 11434 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTC 11493 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||| || || ||||| |||||||| Sbjct 11494 TTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 11525 Score = 105 bits (116), Expect = 7e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | || | |||||| || || || || |||||||| |||| ||||| | || Sbjct 11542 AGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCC 11601 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || | || | ||||||||||| |||||||| || || || || Sbjct 11602 TCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCC 11661 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409 || || || ||| ||| || | |||| ||| || || || || | || | | Sbjct 11662 TGAATCTTAGCCTTGACATTGTCGATCGTAT--CCGACGACTCGACCTCGAGCGTGATCG 11719 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||||||| || || ||||| |||||||| Sbjct 11720 TCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 11753 >seq4126 Length=66405 Score = 105 bits (116), Expect = 7e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64246 CGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCC 64305 |||||| || || || || |||||||| |||| ||||| | || || ||||||||||| Sbjct 66254 CGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCC 66195 Query 64306 GGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTT 64365 ||| | || | ||||||||||| |||||||| || || || ||||| || || ||| Sbjct 66194 AGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTT 66135 Query 64366 TACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || || | || || || || || || | || | ||||||||||||| || Sbjct 66134 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 66075 Query 64426 TTTTACGAAAATTTGCATTTTAATAA 64451 || ||||| |||||||| | || || Sbjct 66074 CTTGACGAAGATTTGCATCTGAACAA 66049 >seq1115 Length=48595 Score = 98.7 bits (108), Expect = 1e-15 Identities = 143/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || ||||| |||||||| || || | |||||| | || || |||||||||||| Sbjct 44723 GTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCG 44664 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | ||||| || |||||||| || || || ||||| || ||||| || || ||| Sbjct 44663 GCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTG 44604 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | || || | || || || | || | ||||||||| || | || Sbjct 44603 ACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTC 44544 Query 64427 TTTACGAAAATTTGCATTTTAA 64448 || || || ||||||| | ||| Sbjct 44543 TTGACAAAGATTTGCACTGTAA 44522 >seq1809 Length=102289 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || ||||| |||||||| || || | |||||| | || || |||||||||||| Sbjct 55382 GTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCG 55323 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 ||| | ||||| || |||||||| || || || ||||| || ||||| || || Sbjct 55322 GCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTT 55270 >seq3162 Length=70493 Score = 82.4 bits (90), Expect = 8e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | || | |||||| || || || ||||||||||| |||| ||||| | || Sbjct 199 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCC 140 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || | ||||| || || ||||| || ||||| || || || || Sbjct 139 TCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCC 80 Query 64352 TGTATTTT 64359 || || || Sbjct 79 TGGATCTT 72 Score = 82.4 bits (90), Expect = 8e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | || | |||||| || || || ||||||||||| |||| || || | || Sbjct 427 AGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTACGGCCATCC 368 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| || | || | ||||||||||| || ||||| ||||| || || Sbjct 367 TCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 308 Query 64352 TGTATTTT 64359 || || || Sbjct 307 TGAATCTT 300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499615295974560