Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011025.1_202016-07-08] 4,724 sequences; 26,244,534 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1620 102 2e-16 >seq1620 Length=45699 Score = 102 bits (112), Expect = 2e-16 Identities = 133/180 (74%), Gaps = 12/180 (7%) Strand=Plus/Minus Query 251486 CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAG 251545 ||||||| || ||||| ||||||||||||||||| |||||||||||||||||||| || | Sbjct 5070 CACCGTGAGAGATCATGCAATCACGCTCCATTTCTCCGAAACGAAGACCACCATCTCGCG 5011 Query 251546 CCCTACCCTCGGCAGGCTGACGAGT-GAGAT-TAACCATAGGACC----GATGGAGCGGC 251599 | |||||| | || || || || |||| | | | |||||| | | ||| | Sbjct 5010 ATCGACCCTCCACGGGTTGTCGGGTCAAGATCTGA--AGAGGACCGCGAGCTCGAGAGTG 4953 Query 251600 TATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 || ||| || || ||||| ||||||||||| |||||| ||| ||||| | | ||| Sbjct 4952 GATTTTG----TCGTTGACCATGTGCTTGAGACGTTGGTAGTATGTTGGACCAAGGTAGA 4897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471728516399988