Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011025.1_202016-07-08] 4,724 sequences; 26,244,534 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4442 279 5e-70 seq4126 138 1e-27 seq2105 138 1e-27 seq1115 131 2e-25 seq1809 129 6e-25 seq3162 116 4e-21 seq1862 86.0 6e-12 >seq4442 Length=13052 Score = 279 bits (308), Expect = 5e-70 Identities = 835/1262 (66%), Gaps = 44/1262 (3%) Strand=Plus/Minus Query 148532 CGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTT 148591 ||||| ||||| || ||||| |||| ||| ||| || |||||| |||||| |||| Sbjct 5499 CGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 5440 Query 148592 GAGCA---GCGCCGCCGACTCGCTTTCGTACGGCATACGC--AGCCGCACAAACGCGTCG 148646 |||| ||||| | | | ||| ||||||| ||| || | || ||||||||| Sbjct 5439 GAGCTTACGCGCCTCGGGCGAA---TCGAACGGCAT-CGCCAAGGC-CATGAACGCGTCG 5385 Query 148647 GCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC 148706 || || || || || || | ||| ||||| ||||| | ||||||| |||| ||| Sbjct 5384 GCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGC-CTC 5326 Query 148707 TC-GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTG 148764 || ||||||| |||| ||||||||| || |||| ||| | || ||||| Sbjct 5325 GATGACGGGATAGTAGTTGACGTCGATGATGCGGTTCAAG-TTGAAAGCGACGACCTTGA 5267 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGGC 148822 | | ||| | | ||| |||||| | | || |||| | |||| || || Sbjct 5266 CGACCTCGTGCAACTTCTTAAAGTCGTACACGCCGTCCTTGATGAAGCTCGG--CAACGC 5209 Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882 ||| ||||| | ||||| ||||| ||| ||||| || |||||| | |||||||| Sbjct 5208 GATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGT 5149 Query 148883 GCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGC 148942 |||||| || | |||||| ||| | |||||||| || || |||| || Sbjct 5148 GCACAGGTTCGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGC 5089 Query 148943 GTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCG 148999 ||| ||||| ||||| | || ||||||||| ||||| | ||| | || | ||| Sbjct 5088 GTCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCA 5029 Query 149000 ATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATA 149059 | || | |||||| | | | || | ||| ||||||| |||||| | Sbjct 5028 AAGC---TTTTGCGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 4972 Query 149060 CA-GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG-CAC 149117 || | ||| |||| ||||||| ||| |||| || |||||| ||| ||||| || Sbjct 4971 CAAGGCGCG-GAACTCCTCGCCATAGACTTCGTGTAGGCCGGGGG-CTTCGGCGGGGCAG 4914 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 | ||| | ||| ||||| | || | || |||| ||| || |||||||| | ||||||| Sbjct 4913 AAGAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGC 4854 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGC---GCCCATGTTGCGGCGCAGGTTG 149234 || | | ||| || || || || |||| | ||| ||| ||| |||| Sbjct 4853 GCAAAGAAGAGATCACGAGC---GCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCC 4797 Query 149235 AGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC 149294 || | ||| | ||| |||||||||||||| | ||| | ||||| || || ||| Sbjct 4796 AGGAATTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGC 4737 Query 149295 ---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCA 149351 ||||| || |||||||||| |||| | ||||||| | || || | ||| || || Sbjct 4736 TTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACA 4677 Query 149352 ATGCCACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTG 149410 ||||| | | ||| |||||| || | ||| |||| ||| || | ||||| Sbjct 4676 ATGCCGTTCG-AGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTG 4618 Query 149411 CACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCG 149469 | | | | ||||| || ||| || ||| |||||| |||||| ||| ||||| Sbjct 4617 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTC-TTAAGCGTGT 4559 Query 149470 AGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCG 149529 ||| ||||| || || || |||||| || | ||| || || || | | |||| Sbjct 4558 CGTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCG 4499 Query 149530 GAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCA 149589 | | |||| ||||| ||| | || || |||||| ||||| || || | || Sbjct 4498 GGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACA 4439 Query 149590 TCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGC 149649 | | | |||||||| | ||||| || ||||| | || |||||||| | |||||| | Sbjct 4438 TAAGGTTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACAC 4379 Query 149650 GCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGT 149709 |||| ||||| || ||||| || || || || ||| | || ||||||||| | Sbjct 4378 GCATGAGCATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGC 4319 Query 149710 TTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGG 149769 ||| || || ||| |||||||||| |||||| | || |||||| ||| | ||| ||| Sbjct 4318 GTTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAG---ATGACGG 4262 Query 149770 CG 149771 || Sbjct 4261 CG 4260 >seq4126 Length=66405 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 66253 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 66195 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 66194 AGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTT 66135 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 66134 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 66075 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 66074 CTTGACGAAGATTTGCAT 66057 >seq2105 Length=11779 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 11329 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 11387 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 11388 AGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTT 11447 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 11448 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 11507 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 11508 CTTGACGAAGATTTGCAT 11525 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 11557 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 11615 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 11616 AGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCCTT 11675 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||| || | | ||| || |||| |||| || ||||||||||| || Sbjct 11676 GACATTGTCGATCGTATCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 11735 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 11736 CTTGACGAAGATTTGCAT 11753 >seq1115 Length=48595 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 44732 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 44674 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 44673 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 44614 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| ||| ||||| Sbjct 44613 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCC 44554 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCA 133659 || || || || || || || |||| Sbjct 44553 CGTGAGGGTCTTGACAAAGATTTGCA 44528 >seq1809 Length=102289 Score = 129 bits (142), Expect = 6e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 55391 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 55333 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 55332 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 55273 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 55272 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 55213 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || || || || ||| || Sbjct 55212 CGTAAGAGTCTTGACAAAGATTTGCCTG 55185 >seq3162 Length=70493 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | ||| | | | ||||||||||||||||| Sbjct 412 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTACGGCCA-TCCTCGAGCTGCTTGCC 354 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || | ||||||||||| || || |||||||||||||| ||||| ||| Sbjct 353 CGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGTCTT 294 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 293 GACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 234 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 233 CTTGACAAAGATCTGCAT 216 Score = 111 bits (122), Expect = 2e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | |||| | | | ||||||||||||||||| Sbjct 184 GTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 126 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| ||||| || |||||| ||| Sbjct 125 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTT 66 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||| ||||| || Sbjct 65 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCCGTCAGCGT 6 Query 133643 TTT 133645 || Sbjct 5 CTT 3 >seq1862 Length=154045 Score = 86.0 bits (94), Expect = 6e-12 Identities = 175/251 (70%), Gaps = 13/251 (5%) Strand=Plus/Plus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC-GCCGACGTGAAA 120552 ||| ||||||| || || |||||||| | ||| || | || || ||| || || Sbjct 92384 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAA-CCGCAGGGAAGAGCCTCGGTCAAG 92442 Query 120553 AACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCAT 120611 || |||||||| || || || |||||||| | ||| ||| | | ||| | ||| | Sbjct 92443 AATTCCTTCTCGATCTCGACGGCCTCCTTAATGATGAGCGCG---ACGGTGTCGGGG--T 92497 Query 120612 CTTGTGTTCGATGCGCGTTCGGTAGTACA---GGCACGCAAAGTCCGTGTGCAGGCCCTC 120668 | |||| | || | | || || ||| |||| |||||||| ||||| |||||||| Sbjct 92498 GAGGCCTTCGCT-CGAGGTGGG-AGAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTC 92555 Query 120669 GTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGAT 120728 ||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 92556 GTCACGCGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAG 92615 Query 120729 GTAGAATATGG 120739 |||| |||| Sbjct 92616 CCAGAAGATGG 92626 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 121039 TTCACGATACTGTCGGCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCG 121098 || ||||| | ||||| ||||||||| || || || |||||| ||| |||| |||||| Sbjct 93203 TTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGATGAAGTAGCGCTCG 93262 Query 121099 TCGTCCGTGAGCTTGTGCGCAAAATCGT-CATAGTCCTTGGACAGGTCGACCTCCTC 121154 ||| | ||||||||| | | |||| ||| ||||||||||||||| | ||| || Sbjct 93263 TCGGGCTTGAGCTTGTTGTCCCAGTCGTGCAT-GTCCTTGGACAGGTCCATCTCTTC 93318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483392254001760