Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011195.1_202016-07-08] 4,858 sequences; 26,275,703 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2647 82.4 5e-11 >seq2647 Length=45605 Score = 82.4 bits (90), Expect = 5e-11 Identities = 112/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 33565 CGCATACCAGAGATGGGCGACAAGTTTGCATCGT-TCACGGCCCAGAAGGGCACGTGCGG 33623 || || || ||||| |||||||| ||||| || |||||| | |||| |||||| ||| Sbjct 41222 CGTATTCCGGAGATCGGCGACAAATTTGCTTCACGTCACGGGC-AGAAAGGCACGATCGG 41164 Query 33624 CATGATGTACGACCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGT 33683 || | ||| ||| |||||||||||| | ||||| || |||| ||| | | Sbjct 41163 TATCACCTACCGCCACGAAGACATGCCGTTCTCCGCCGAGGGTACAATCCCCGACATCAT 41104 Query 33684 CATCAACCCGCATGCGTTCCCCTCGCGCATGACG 33717 ||||||||||||||| | || || || |||||| Sbjct 41103 CATCAACCCGCATGCCATTCCTTCTCGGATGACG 41070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356212508521774