Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011195.1_202016-07-08] 4,858 sequences; 26,275,703 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1502 201 2e-46 seq2472 188 1e-42 seq2415 178 2e-39 seq2405 170 4e-37 seq3415 163 5e-35 seq1989 161 2e-34 seq1941 159 6e-34 seq2236 113 8e-20 seq2181 102 2e-16 seq2146 87.8 3e-12 seq1013 84.2 4e-11 >seq1502 Length=38635 Score = 201 bits (222), Expect = 2e-46 Identities = 299/419 (71%), Gaps = 4/419 (1%) Strand=Plus/Minus Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305 ||| | ||| ||||||| | ||||| ||||| || || |||||||| ||||| || Sbjct 12746 CTGCATCATCCTCCACATACCCTCGACGTAGTCGGCGGCGTGTCCCCAATCACGCTTGGC 12687 Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGC 268364 ||||| || |||||| | ||||| | ||| | |||||| | | || || | | | | Sbjct 12686 CTCCATATTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGCGAGATCTCG-GCGACAGCTC 12628 Query 268365 GAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGA 268424 | | || || | || || || || ||||| | ||| |||||||||||| | || Sbjct 12627 GGGAAATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAACAAGA 12568 Query 268425 TGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAA 268484 | |||||||||||| ||||||| || ||||| ||||||||| ||| ||||||| || Sbjct 12567 TACCGTTGCACGCGTACATGCCGTACGCCTCGCGGTAGTTCTTGACGATCCAGTAGGCGT 12508 Query 268485 ACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGA 268544 ||| ||| || ||| |||| || ||||| || | |||||||||||| ||||||| Sbjct 12507 ACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGAGGGG 12448 Query 268545 TTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTT 268603 | || ||| ||||| | | |||||| ||||| ||||||||||| | || || Sbjct 12447 TCTCGACGACCTTGCCGTACAACTCGGAAGTCGAGGCTTGGTAGAAGCGGACGTGCTTGG 12388 Query 268604 TCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662 || || || ||| ||||||| || ||||| | ||| || ||||| | || || ||||| Sbjct 12387 TCAAG-CCACAGGTTCGGATCGCGTCGAGGAGACGCAGTGTTCCAAGACCGTCGACGTC 12330 >seq2472 Length=42034 Score = 188 bits (208), Expect = 1e-42 Identities = 283/397 (71%), Gaps = 4/397 (1%) Strand=Plus/Minus Query 268268 TCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGG 268327 || || || || || || || |||||||| ||||| || |||||||| |||||| | ||| Sbjct 5811 TCAACGTAATCGCGGGCGTGTCCCCAATCACGCTTGGCCTCCATGTTACCGAGGTAAAGG 5752 Query 268328 CATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAA 268386 || | ||| | |||||| | | || || | |||| | ||| |||| || ||||| Sbjct 5751 CAATCCTGTTGACCGAGCGAGATCTCG-GCGACGGCGCGTGAGATCTTTCTCGTGACGAA 5693 Query 268387 CGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCC 268446 || |||||| | ||| |||||||||||||||||| |||||||||||| ||||| | Sbjct 5692 GGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCGTTGCACGCGTACATGTC 5633 Query 268447 ATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGG 268506 || | ||| ||||||||| ||| ||||| | || ||| ||| || ||| |||| || Sbjct 5632 GTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAACTTGGCGACTCCGTAGGG 5573 Query 268507 AGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAG 268566 ||||| || | |||||| ||||| |||||| | || || ||||| | | Sbjct 5572 CGAACGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCGACAACCTTGCCGTACAA 5513 Query 268567 CTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTG 268625 ||| |||||||| || |||||||| | || || || || ||||| | ||||| | Sbjct 5512 CTCCGAGGTCGAGGCCTGGTAGAAGCGGACGTGCTTGGTCAAG-CCGCAAGTGCGGATGG 5454 Query 268626 CCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662 | ||||| | ||| || ||||||| || || || || Sbjct 5453 CGTCGAGGAGACGGAGTGTTCCCAGACCGTCAACATC 5417 >seq2415 Length=48512 Score = 178 bits (196), Expect = 2e-39 Identities = 175/226 (77%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| ||||||||||| || |||| Sbjct 44670 CCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 44611 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| ||||| || ||||| | ||| ||||| || || Sbjct 44610 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 44551 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| | ||||||| ||||| ||||| | || || || Sbjct 44550 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 44491 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 || | ||||||||| || ||||||||||||||||| || || |||| Sbjct 44490 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 44445 >seq2405 Length=70258 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| ||||| ||||| || |||||||| ||||| | | Sbjct 69817 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 69876 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | || || ||||| || ||| Sbjct 69877 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 69936 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| |||||||| | ||||||| ||||| ||||| | || || || Sbjct 69937 ATGCCTTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGACC 69996 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || ||||| || |||||||| || |||||||| Sbjct 69997 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 70043 >seq3415 Length=158045 Score = 163 bits (180), Expect = 5e-35 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| ||||||||||| || |||| Sbjct 55375 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 55316 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| ||||| || ||||| | ||| ||||| || || Sbjct 55315 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 55256 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| | ||||||| ||||| ||||| | || || || Sbjct 55255 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 55196 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || | |||||| || || ||||| || |||||||| || || ||| Sbjct 55195 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 55151 >seq1989 Length=66411 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| ||||| ||||| || ||||| || ||||||| | Sbjct 66289 CCACCTCGGAGACGGAGAACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 66230 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || | || || ||||| || ||| Sbjct 66229 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGGA 66170 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| ||||||||| ||||| ||||| | || || || Sbjct 66169 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 66110 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || |||||||||||||| || ||||| Sbjct 66109 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 66063 Score = 98.7 bits (108), Expect = 2e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 68343 TGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCT 68402 ||||| || |||||||| ||||||||||| ||||| ||||||||| ||||| ||||| Sbjct 66409 TGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCC 66350 Query 68403 GCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || || | || || || || || || |||||||||||||| || ||||| Sbjct 66349 GAGGACTCGACCTCGAGCGTAATCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 66291 >seq1941 Length=11988 Score = 159 bits (176), Expect = 6e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || || || || | |||||||| ||||| ||||| || ||||| || ||||||| Sbjct 11735 TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGC 11794 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 ||| || | ||||| || | |||||| || ||||| || | || || ||||| || || Sbjct 11795 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGG 11854 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||||| |||||||| |||||||| |||||||| ||||| || || | || || || Sbjct 11855 AATGCCCTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATCGTATCCGACGACTCGAC 11914 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || |||||||||||||| || ||||| Sbjct 11915 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 11962 >seq2236 Length=166925 Score = 113 bits (124), Expect = 8e-20 Identities = 126/164 (77%), Gaps = 6/164 (4%) Strand=Plus/Plus Query 9937 TGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGA 9996 |||| |||| ||| ||||| ||||| || || |||||||||||| | ||||||||||| Sbjct 92117 TGAC-CCCGACTTTTGGTAATCCGAAACACGCTTCTCGAAGAAGTTTGTCTTGCCCTCGA 92175 Query 9997 GGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCG--CCAAACTGCTTGGGGTAACC 10054 | || || | | ||| ||||||||||||||||||||| ||| || |||||||| || Sbjct 92176 GCGAGATCATATTCATAAAGTCAAAGGGGTTCTCGGCGTTCCAGAC--CTTGGGGTTGCC 92233 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTA-CTGG 10097 | || || | ||||| || |||||||||||||| |||| Sbjct 92234 CAAGGCGACCAACAATCGGTCGGCGACGAACTCGATGTATCTGG 92277 >seq2181 Length=108033 Score = 102 bits (112), Expect = 2e-16 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||||||||||||||| | | ||| | || ||||| | ||| ||||||||||| Sbjct 15586 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATATGGTGGAAC 15645 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || || ||||| |||||||| | |||| |||||| |||||| || | || ||| Sbjct 15646 GCGTGTTGGGCCACGTACGCGACACGCAAGTTGGGGTGCTTCTCAACCTTG-CCTTCGTC 15704 Query 225098 -GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156 ||| | |||||| || | || |||||| || || | || || ||||| |||||||| Sbjct 15705 GGGTACGGTCTCGCCCGTCAAGAGCTTGATCAGGGTCGATTTACCGGCACCGTTGGGGCC 15764 >seq2146 Length=46347 Score = 87.8 bits (96), Expect = 3e-12 Identities = 447/710 (63%), Gaps = 2/710 (0%) Strand=Plus/Plus Query 175975 CCTTGAACCCCCGATACCAAGGGGTCATTGGGAGCATCGTCTCGTTGTTAATGAGGCGCT 176034 ||||||| || || ||||||||| ||| || |||| ||| | || |||| Sbjct 11455 CCTTGAATCCACGGTACCAAGGGTGCATCGGTTCCATCTCCTCACCTCTCATCTTGCGCC 11514 Query 176035 TCACATTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGTGCTAAATCCTGTTC 176094 | | ||| | || |||||| | ||||||||| || | | || |||| |||| Sbjct 11515 TTAAGTTGGCCACAATATCCGTCGGGTTGTAATTGGGCACCGATGAACTCCATCCCGTTC 11574 Query 176095 CTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTCCGGTT 176154 | || || ||| ||||| |||| | |||||| |||| | || | ||| | Sbjct 11575 CAATACCCTCCGAGCCATTGACCAAAGCCATGGGGATGATGGGGATGTACCAAGACGGCT 11634 Query 176155 CAATCCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGCTCGTCGGCCTTGTGGAAAA 176214 | || | | || ||||| | |||||| | |||| | || || || ||||| | Sbjct 11635 CGATGCTTTGCCCATCATCGTTGAGGTATTCGAGCACGCTGTCATCAGCGGGATGGAAGA 11694 Query 176215 TATCCCGGGTGTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGC 176274 || ||| ||| || | | |||||||| || | ||| || || ||| || | Sbjct 11695 CGCTACGCGTGATGGATGATACGTTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTAC 11754 Query 176275 CTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAAC 176334 | || || || || | ||| ||||| ||| || || | |||| ||| || || | Sbjct 11755 CACCTTGCAGACGCGTACCAAATTGACCGTTCGGGTCGAGAATGTTGAGGTTGTTGGACC 11814 Query 176335 CCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGAT 176394 | ||| | | ||| |||| |||| |||| ||| || | | | || ||||| || | Sbjct 11815 CGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGT 11874 Query 176395 AGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTACGAGGT 176454 | | | || ||| ||| ||| | || || |||| ||||| || || | | Sbjct 11875 ACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACT 11934 Query 176455 TGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACGACCG 176514 ||||||| || ||||| | ||| || || ||||| | ||||| | ||| | Sbjct 11935 TGCGCTTGAAGCAACCGAACAAGACCTTGCGTTGACCCGGCTTAAACCCATCAATGACAG 11994 Query 176515 ACGGAATGGAACGCTCTACATCGTATCTTGAAAAAAGGATAAGGTCTTTGTTTATGAAAT 176574 | ||||| || ||| | ||| | || || ||||| | || ||||| ||||||| Sbjct 11995 AGGGAATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATGAAAT 12054 Query 176575 CCTCCACTGGAATCTTC-GTGAGCTTCTGGTCGAGCTGGTTGCCAGGCTCGAAATCAAGG 176633 |||| | || | |||| | || | |||||||| | |||| || |||| | || Sbjct 12055 CCTCGATCGGGA-CTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGACGAAGCCTCGG 12113 Query 176634 AGCCACGTCTTCCGTTCGTCCGCCCGAGACTTGTTGAAAGACTTGTCAAT 176683 ||||| ||| || | ||| ||| ||||||||| | | |||| || Sbjct 12114 AGCCATTCCTTGCGGTTGTCGGCCTTCTTCTTGTTGAAGGCCATGTCGAT 12163 >seq1013 Length=38513 Score = 84.2 bits (92), Expect = 4e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 68356 TGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTT 68415 ||||||||||||| || ||||| | ||||||| ||||| ||||| | || || || | Sbjct 1 TGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCT 60 Query 68416 CCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | | ||||| || || ||||| || |||||||| || |||||||| Sbjct 61 CGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921566434479760