Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011195.1_202016-07-08] 4,858 sequences; 26,275,703 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2544 279 5e-70 seq1989 138 1e-27 seq2415 131 2e-25 seq3415 129 6e-25 seq1941 129 6e-25 seq2405 116 4e-21 seq2236 86.0 6e-12 >seq2544 Length=15486 Score = 279 bits (308), Expect = 5e-70 Identities = 835/1262 (66%), Gaps = 44/1262 (3%) Strand=Plus/Plus Query 148532 CGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTT 148591 ||||| ||||| || ||||| |||| ||| ||| || |||||| |||||| |||| Sbjct 10146 CGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 10205 Query 148592 GAGCA---GCGCCGCCGACTCGCTTTCGTACGGCATACGC--AGCCGCACAAACGCGTCG 148646 |||| ||||| | | | ||| ||||||| ||| || | || ||||||||| Sbjct 10206 GAGCTTACGCGCCTCGGGCGAA---TCGAACGGCAT-CGCCAAGGC-CATGAACGCGTCG 10260 Query 148647 GCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC 148706 || || || || || || | ||| ||||| ||||| | ||||||| |||| ||| Sbjct 10261 GCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGC-CTC 10319 Query 148707 TC-GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTG 148764 || ||||||| |||| ||||||||| || |||| ||| | || ||||| Sbjct 10320 GATGACGGGATAGTAGTTGACGTCGATGATGCGGTTCAAG-TTGAAAGCGACGACCTTGA 10378 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGGC 148822 | | ||| | | ||| |||||| | | || |||| | |||| || || Sbjct 10379 CGACCTCGTGCAACTTCTTAAAGTCGTACACGCCGTCCTTGATGAAGCTCGG--CAACGC 10436 Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882 ||| ||||| | ||||| ||||| ||| ||||| || |||||| | |||||||| Sbjct 10437 GATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGT 10496 Query 148883 GCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGC 148942 |||||| || | |||||| ||| | |||||||| || || |||| || Sbjct 10497 GCACAGGTTCGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGC 10556 Query 148943 GTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCG 148999 ||| ||||| ||||| | || ||||||||| ||||| | ||| | || | ||| Sbjct 10557 GTCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCA 10616 Query 149000 ATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATA 149059 | || | |||||| | | | || | ||| ||||||| |||||| | Sbjct 10617 AAGC---TTTTGCGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 10673 Query 149060 CA-GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG-CAC 149117 || | ||| |||| ||||||| ||| |||| || |||||| ||| ||||| || Sbjct 10674 CAAGGCGCG-GAACTCCTCGCCATAGACTTCGTGTAGGCCGGGGG-CTTCGGCGGGGCAG 10731 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 | ||| | ||| ||||| | || | || |||| ||| || |||||||| | ||||||| Sbjct 10732 AAGAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGC 10791 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGC---GCCCATGTTGCGGCGCAGGTTG 149234 || | | ||| || || || || |||| | ||| ||| ||| |||| Sbjct 10792 GCAAAGAAGAGATCACGAGC---GCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCC 10848 Query 149235 AGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC 149294 || | ||| | ||| |||||||||||||| | ||| | ||||| || || ||| Sbjct 10849 AGGAATTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGC 10908 Query 149295 ---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCA 149351 ||||| || |||||||||| |||| | ||||||| | || || | ||| || || Sbjct 10909 TTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACA 10968 Query 149352 ATGCCACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTG 149410 ||||| | | ||| |||||| || | ||| |||| ||| || | ||||| Sbjct 10969 ATGCCGTTCG-AGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTG 11027 Query 149411 CACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCG 149469 | | | | ||||| || ||| || ||| |||||| |||||| ||| ||||| Sbjct 11028 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTC-TTAAGCGTGT 11086 Query 149470 AGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCG 149529 ||| ||||| || || || |||||| || | ||| || || || | | |||| Sbjct 11087 CGTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCG 11146 Query 149530 GAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCA 149589 | | |||| ||||| ||| | || || |||||| ||||| || || | || Sbjct 11147 GGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACA 11206 Query 149590 TCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGC 149649 | | | |||||||| | ||||| || ||||| | || |||||||| | |||||| | Sbjct 11207 TAAGGTTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACAC 11266 Query 149650 GCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGT 149709 |||| ||||| || ||||| || || || || ||| | || ||||||||| | Sbjct 11267 GCATGAGCATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGC 11326 Query 149710 TTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGG 149769 ||| || || ||| |||||||||| |||||| | || |||||| ||| | ||| ||| Sbjct 11327 GTTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAG---ATGACGG 11383 Query 149770 CG 149771 || Sbjct 11384 CG 11385 >seq1989 Length=66411 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 66259 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 66201 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 66200 AGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTT 66141 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 66140 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 66081 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 66080 CTTGACGAAGATTTGCAT 66063 >seq2415 Length=48512 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 44649 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 44591 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 44590 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 44531 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| ||| ||||| Sbjct 44530 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCC 44471 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCA 133659 || || || || || || || |||| Sbjct 44470 CGTGAGGGTCTTGACAAAGATTTGCA 44445 >seq3415 Length=158045 Score = 129 bits (142), Expect = 6e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 55354 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 55296 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 55295 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 55236 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 55235 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 55176 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || || || || ||| || Sbjct 55175 CGTAAGAGTCTTGACAAAGATTTGCCTG 55148 >seq1941 Length=11988 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 11766 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 11824 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 11825 AGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCCTT 11884 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||| || | | ||| || |||| |||| || ||||||||||| || Sbjct 11885 GACATTGTCGATCGTATCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 11944 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 11945 CTTGACGAAGATTTGCAT 11962 >seq2405 Length=70258 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | ||| | | | ||||||||||||||||| Sbjct 69847 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTACGGCCA-TCCTCGAGCTGCTTGCC 69905 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || | ||||||||||| || || |||||||||||||| ||||| ||| Sbjct 69906 CGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGTCTT 69965 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 69966 GACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 70025 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 70026 CTTGACAAAGATCTGCAT 70043 Score = 111 bits (122), Expect = 2e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | |||| | | | ||||||||||||||||| Sbjct 70075 GTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 70133 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| ||||| || |||||| ||| Sbjct 70134 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTT 70193 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||| ||||| || Sbjct 70194 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCCGTCAGCGT 70253 Query 133643 TTT 133645 || Sbjct 70254 CTT 70256 >seq2236 Length=166925 Score = 86.0 bits (94), Expect = 6e-12 Identities = 175/251 (70%), Gaps = 13/251 (5%) Strand=Plus/Plus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC-GCCGACGTGAAA 120552 ||| ||||||| || || |||||||| | ||| || | || || ||| || || Sbjct 92354 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAA-CCGCAGGGAAGAGCCTCGGTCAAG 92412 Query 120553 AACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCAT 120611 || |||||||| || || || |||||||| | ||| ||| | | ||| | ||| | Sbjct 92413 AATTCCTTCTCGATCTCGACGGCCTCCTTAATGATGAGCGCG---ACGGTGTCGGGG--T 92467 Query 120612 CTTGTGTTCGATGCGCGTTCGGTAGTACA---GGCACGCAAAGTCCGTGTGCAGGCCCTC 120668 | |||| | || | | || || ||| |||| |||||||| ||||| |||||||| Sbjct 92468 GAGGCCTTCGCT-CGAGGTGGG-AGAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTC 92525 Query 120669 GTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGAT 120728 ||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 92526 GTCACGCGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAG 92585 Query 120729 GTAGAATATGG 120739 |||| |||| Sbjct 92586 CCAGAAGATGG 92596 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 121039 TTCACGATACTGTCGGCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCG 121098 || ||||| | ||||| ||||||||| || || || |||||| ||| |||| |||||| Sbjct 93173 TTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGATGAAGTAGCGCTCG 93232 Query 121099 TCGTCCGTGAGCTTGTGCGCAAAATCGT-CATAGTCCTTGGACAGGTCGACCTCCTC 121154 ||| | ||||||||| | | |||| ||| ||||||||||||||| | ||| || Sbjct 93233 TCGGGCTTGAGCTTGTTGTCCCAGTCGTGCAT-GTCCTTGGACAGGTCCATCTCTTC 93288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483391444271920