Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011535.1_202016-07-08] 4,783 sequences; 26,146,073 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq2564 105 5e-18 >seq2564 Length=86730 Score = 105 bits (116), Expect = 5e-18 Identities = 229/338 (68%), Gaps = 6/338 (2%) Strand=Plus/Minus Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986 |||||||||| || | ||||||||||| || || || || ||| | | | |||| Sbjct 21478 TTCCAAGCACTCAAAATGATCCTTCTATCGGTGGGATTCTCCTTGATACTCTTGA-CAAC 21420 Query 101987 T-GTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTT--TATATTCT 102043 | | | || || || || |||| || | |||||| || || | |||| ||| Sbjct 21419 TTGCATCAACTGATCGACCCCTTTCCCCTGATAATCAT--CCTTGGCCGTCCTATACTCT 21362 Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103 || ||||||||||||||||| || ||||| || ||||| | ||| || || || || | | Sbjct 21361 GCGCCGAAATGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGA 21302 Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCA 102163 || |||| ||||| | ||| ||| ||||||||| |||||||||| | || || Sbjct 21301 CCCAACCCAACCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCC 21242 Query 102164 GCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACA 102223 | || | ||| || || ||||||| | ||||| | |||||| |||| Sbjct 21241 TTGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCAATG 21182 Query 102224 ACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGG 102261 | ||||| | ||| || |||| || || ||||| || Sbjct 21181 ATACCTCGCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 21144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361230141651533