Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011535.1_202016-07-08] 4,783 sequences; 26,146,073 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1217 158 3e-33 seq2148 152 1e-31 seq2433 143 6e-29 seq2875 140 7e-28 seq2090 132 1e-25 >seq1217 Length=66466 Score = 158 bits (174), Expect = 3e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| || || ||||| || || |||||||||||||| || || | ||||| || Sbjct 140 AACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTC 199 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || || ||||| | ||| || ||||||||||||||||| || |||||||| Sbjct 200 GAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTG 259 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||||||||| || || |||||||| || || || || || | |||||| Sbjct 260 GATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTT 319 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | |||||| Sbjct 320 GCCGGTCAGGGTCTTGACGAAGATTTGCAT 349 Score = 93.3 bits (102), Expect = 9e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 195022 TGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCC 195081 ||||||||||||||||| || |||||||| || || ||||||||| || || |||||| Sbjct 3 TGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCC 62 Query 195082 GAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || || || |||| |||||| || |||| || || ||||| | |||||| Sbjct 63 GAGGACTCGACCTCGAGCGTAATCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 121 >seq2148 Length=14236 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || |||||||||||||| || || | ||||| |||||||| Sbjct 230 GTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTG 171 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | ||| || ||||||||||||||||| || ||||| ||||| || Sbjct 170 CTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTT 111 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| || || || || ||||| || || || || || | |||||| || || Sbjct 110 AGCCTTGACATTGTCGATCGTATCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGT 51 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | |||||| Sbjct 50 CAGGGTCTTGACGAAGATTTGCAT 27 >seq2433 Length=109699 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || |||||||||||||| || || | ||||| |||||||| Sbjct 39147 GTGGAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTG 39088 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | ||| || |||||||| ||||||||||| ||||| || || || Sbjct 39087 CTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 39028 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || || |||||||| || || || || || | |||||| || || Sbjct 39027 GGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCCGT 38968 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 38967 AAGCGTCTTGACAAAGATCTGCAT 38944 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || ||||||||||| || || | ||||| |||||||| Sbjct 39375 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTG 39316 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || |||||||||||||| |||||||| || || || || || || Sbjct 39315 CTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTT 39256 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || || |||||||| || || || || || | |||||| || || Sbjct 39255 GGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCCGT 39196 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || || || | ||||| Sbjct 39195 CAGCGTCTTGACAAAGATCTGCAT 39172 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || || || |||||||| || || || | ||||| |||||||| Sbjct 39603 GTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTACGGCCATCCTCGAGCTG 39544 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | ||| || |||||||| ||||||||||| ||||| ||||| || Sbjct 39543 CTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTT 39484 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || || |||||||| || || || || || | |||||| || || Sbjct 39483 GGTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGT 39424 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || || || | ||||| Sbjct 39423 AAGCGTCTTGACAAAGATCTGCAT 39400 >seq2875 Length=107407 Score = 140 bits (154), Expect = 7e-28 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| ||||| || ||||| ||||| | || | ||||| |||||||| Sbjct 55295 GTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTG 55236 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || ||||| |||||||| || |||||||| |||||||| || || Sbjct 55235 CTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTT 55176 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || || ||||| || || || || ||||| | |||||| || || Sbjct 55175 GGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGT 55116 Query 195117 CAAAGTTTTTACGAACACTTGC 195138 | ||| || || || | |||| Sbjct 55115 AAGAGTCTTGACAAAGATTTGC 55094 >seq2090 Length=47937 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| ||||| || ||||| ||||| | || | ||||| |||||||| Sbjct 3866 GTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTG 3925 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || ||||| |||||||| || |||||||| |||||||| || || Sbjct 3926 CTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTT 3985 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||| || || ||||| || || || || ||||| | ||||| || || Sbjct 3986 GGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGT 4045 Query 195117 CAAAGTTTTTACGAACACTTGCA 195139 | || || || || | ||||| Sbjct 4046 GAGGGTCTTGACAAAGATTTGCA 4068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109413608540561