Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011535.1_202016-07-08] 4,783 sequences; 26,146,073 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1434 131 3e-25 >seq1434 Length=16524 Score = 131 bits (144), Expect = 3e-25 Identities = 600/943 (64%), Gaps = 28/943 (3%) Strand=Plus/Minus Query 213192 GCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTG 213251 |||| ||||| |||| || | || |||| ||||||||| || || || | | ||||| Sbjct 6369 GCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTG 6310 Query 213252 AGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGC 213311 ||||| ||||| || || ||| |||||| || | |||| | || || || Sbjct 6309 AGCTTACGCGCCTCGGGCGAATCGAACGGCATCGCCAAGGCCATGAACGCGTCGGCGAGA 6250 Query 213312 CCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAA 213370 || || || |||||||||||||| | ||| | | ||| || || | || ||| | Sbjct 6249 CCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGC-CTCGATGAC 6191 Query 213371 GGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATG 213430 ||| || ||||| ||||||||| ||| | |||| | | | || ||| ||| | Sbjct 6190 GGGATAGTAGTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTC 6131 Query 213431 GGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA-CTCAGGCAGGGCGA 213489 | || | || | || |||| | ||||||| | || ||| |||| |||| Sbjct 6130 GTGCAACTTCT------TAAAGTCGTACACGCCGTCCTTGATGAAGCTC-GGCAACGCGA 6078 Query 213490 TGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGC 213549 | ||||| |||||| ||||| ||| | | | | |||||| ||||||||||||| Sbjct 6077 TCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGC 6018 Query 213550 ACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAAT 213609 ||||||| | ||| ||||| || |||| ||||| || || ||| || | | Sbjct 6017 ACAGGTTCGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGCGT 5958 Query 213610 CCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGA 213669 | ||||||||||| | ||| || || || | ||||| | || ||| | ||| | Sbjct 5957 CTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAA 5898 Query 213670 GGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCC---TCGTACTGTTCGT 213726 | | || || | | || | ||| | | || ||||| | ||| Sbjct 5897 GCTTTTGCGCGGGGATCGTTTTCTTGGC----GCGGCCCT--CCTTTTCGTATTTCTCGA 5844 Query 213727 AGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGAT---GCGGGAC 213783 | | || ||| || | ||| |||| || || || || || | ||||| | Sbjct 5843 ACAAGGCGCGGAACTCCTCGCCATAGACTTCGTGTAGGCCGGG---GGCTTCGGCGGGGC 5787 Query 213784 ACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACA 213843 | | ||| ||| || ||| | | ||| | || |||||| || || || | ||| | Sbjct 5786 AGAAGAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGA 5727 Query 213844 GCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTA 213903 |||| ||| || || | | | || ||| || ||| ||||| || || | Sbjct 5726 GCGCAAAGAAGAGATCACGAGCGCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCA 5667 Query 213904 GAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCC 213960 | || || |||| ||| |||||||||||||| | |||||| || ||||| || | || Sbjct 5666 GGAATTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCT 5607 Query 213961 TCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCA 214020 | ||||| || ||||| || | || ||||| ||| || || | ||| || | Sbjct 5606 TGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACAA 5547 Query 214021 GCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCA 214080 ||||| || | ||||| || || || || || ||||||| || | | |||| | Sbjct 5546 TGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGA 5487 Query 214081 TGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCA 214123 || | || || ||||||||| ||||||||| | ||||| Sbjct 5486 TGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCA 5444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931477105982720