Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011535.1_202016-07-08] 4,783 sequences; 26,146,073 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1434 446 2e-120 seq2799 95.1 1e-14 seq2633 86.0 7e-12 >seq1434 Length=16524 Score = 446 bits (494), Expect = 2e-120 Identities = 781/1126 (69%), Gaps = 12/1126 (1%) Strand=Plus/Plus Query 19116 TCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTCCGCGAGACATACG 19175 ||||||| ||||| ||||||||||| || ||||| | ||| ||| || | ||| Sbjct 5244 TCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAGCGCGTCTTGCAGTCGTACA 5303 Query 19176 ACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACGCCGGTACGA 19235 |||| ||| | || | ||| || ||||| ||||||| || ||||||||||| ||| Sbjct 5304 ACCTTATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGC 5363 Query 19236 ACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCA 19295 |||||||| | ||| ||||||||| || | ||||||||||| ||||| |||| Sbjct 5364 CTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGATGATTCGATTGAAGGCA 5423 Query 19296 TCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCC 19355 | ||||| ||||| ||| |||||||| |||||||||| |||| |||||||| | Sbjct 5424 TTTACGACACGCTTAAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGA 5483 Query 19356 ACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGAGTAGCCGA-C 19414 | | || ||||| ||| || | ||| || |||||||| || ||| | Sbjct 5484 GCATCCACAACATCCGCGCGACCGGCTCCTACATCGCCGGCACGAACGGC-TACTCGAAC 5542 Query 19415 GGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGGGGGGC 19474 || || ||||| |||||||| |||| ||||||||| || | |||||| |||| || ||| Sbjct 5543 GGCATTGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGC 5602 Query 19475 GGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGAT 19534 ||| || || | ||||| |||||||||||||| |||||||| |||||| | || Sbjct 5603 AACAAGCGTCCCGGAGCCTTCGCGATCTACCTCGAGCCGTGGCACGCCGACGTCTTCGAA 5662 Query 19535 TTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACG 19594 ||||| || || ||| |||||| || | ||||| | ||| ||| || |||||| Sbjct 5663 TTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTTCGCGCTCGTGATCTCTTCTTT 5722 Query 19595 GCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTG 19654 || | |||||||| || || ||||||||| || ||| | || || |||| || Sbjct 5723 GCGCTCTGGATTCCCGATCTTTTCATGGAGCGTGTCGAGGCCGCCGGCGATTGGCCTCTC 5782 Query 19655 ATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTTCAATGAGTTG 19714 | ||||| |||| ||| ||||||| ||| ||||| ||||||| |||| | ||| Sbjct 5783 TTCTGCCCCGCCGAAGCCCCCGGCCTACACGAAGTCTATGGCGAGGAGTTCCGCGCCTTG 5842 Query 19715 TACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCCGGGACGTCTGG 19774 | | || |||| | ||||||| |||||| | ||| || | | | ||| Sbjct 5843 TTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAACGATCCCCGCGCAAAAGCTTTGG 5902 Query 19775 GACCGCG-TCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATGTGCTACAAGGACGC 19833 | |||| | || || ||||||||| || |||| || | ||| |||||| ||||| Sbjct 5903 TA-CGCGATTCTTGAAGCCCAGGTCGAAACTGGCAACCCTTTTATGCTCTACAAAGACGC 5961 Query 19834 CGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAACCTGTGTAC 19893 ||||||| || || || || ||||| | ||| ||||||||||||| |||||||| || Sbjct 5962 CGCGAACAAGAAATCGAACCAAAAGAATCTTGGCACGATCAAGTCGTCGAACCTGTGCAC 6021 Query 19894 TGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCGTCCCTGTG 19953 || ||||| ||| || |||||||||| ||||| || || |||| || | Sbjct 6022 CGAGATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTCTGCAACTTGGCCTCGATCGC 6081 Query 19954 CCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTGTACGAGGTGACCCG 20013 |||||| ||| |||||| | | | ||||||| || ||| ||||||| | Sbjct 6082 GTTGCCGAGCTTCATCAAGGACGGCGTGTACGACTTTAAGAAGTTGCACGAGGTCGTCAA 6141 Query 20014 GGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA-CCCG--ACCGAGGC 20070 ||||||| | || |||| ||| ||||||| |||| || |||| | ||| Sbjct 6142 GGTCGTCGCTTTCAACTTGAACCGCATCATCGACGTCAACTACTATCCCGTCATCGA--- 6198 Query 20071 GGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGA 20130 ||||| || || || | |||||||| || |||| ||||| || || || || ||||| Sbjct 6199 GGCGCAAAACTCCAACTTCCGCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGA 6258 Query 20131 CGTTTTCATGATGCTCGGC-CTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGG 20189 || |||||| || ||| | | ||||| ||| ||||||| ||||||||||| Sbjct 6259 CGCGTTCATG-GCCTTGGCGATGCCGTTCGATTCGCCCGAGGCGCGTAAGCTCAACAAGC 6317 Query 20190 GCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTGCGA 20235 ||||||||| || | |||||||| || || | |||||||| Sbjct 6318 AAATCTTCGAGACCATCTACCACGCCGCGATCGAGTCGTCGTGCGA 6363 Score = 425 bits (470), Expect = 6e-114 Identities = 790/1148 (69%), Gaps = 15/1148 (1%) Strand=Plus/Minus Query 78775 GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCC 78834 ||||||| | || |||||||| | | ||||||||| ||||||||||| |||||| Sbjct 6354 GACTCGATC---GCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTACGCGCC 6298 Query 78835 TTGGTCTCGTCGAACGAAAG-GCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCC 78893 | || | ||||||| | ||| || |||||| | ||||| || || || || || Sbjct 6297 TCGGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCGAGACCTTGCACTCC 6239 Query 78894 GATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGT--CGGG-TAAAA 78950 ||| |||| || |||||||| | |||| ||| | ||||||| | |||| || | Sbjct 6238 GATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTG---CGCCTCGATGACGGGATAGTA 6182 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| ||||||| |||||||| ||| | ||||||| ||||||| ||| || Sbjct 6181 GTTGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTTGACGACCTCGTGCAACTT 6122 Query 79011 GGCGAAATCAAA-ATGATTTCCTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGC 79069 || || | | | ||||| |||||| |||| | | ||| |||| ||||| Sbjct 6121 CTTAAAGTCGTACACGCCGTCCTT-GATGAAGCTCGGCAACGCGATCGAGGCCAAGTTGC 6063 Query 79070 ACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACT 79129 | ||||| ||||||||| || ||||||||| || ||||||| || ||||||| Sbjct 6062 AGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGTGCACAGGTTCGACGACT 6003 Query 79130 TGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGT 79189 |||| ||||| | ||||| ||||| |||| ||| |||||| |||||| ||| Sbjct 6002 TGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGCGTCTTTGTAGAGCATAA 5943 Query 79190 ACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 | || | || || || ||||| | |||| ||| ||| | | | || ||| Sbjct 5942 AAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCAAAGCTTTTGCGCGGGGA 5883 Query 79250 CAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGCCTCCC 79309 |||||| || |||| |||| || | |||| || ||| |||| | Sbjct 5882 TCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAACAAGGCGCGGAACTCCTCGC 5823 Query 79310 CATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCT 79369 ||||||| ||| | ||||| ||| ||| ||||| | || |||| || || | Sbjct 5822 CATAGACTTCGTGTAGGCCGGGGGCTTCGGCGGGGCAGAAGAGAGGCCAATCGCCGGCGG 5763 Query 79370 TCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAAC 79429 ||| || ||||||||| || || || ||||| || || |||||| || || | Sbjct 5762 CCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGCGCAAAGAAGAGATCACGAGCGC 5703 Query 79430 GCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCC 79489 | | ||||| | ||| |||||| || || || || || || | || ||||||||||| Sbjct 5702 GAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAATTCGAAGACGTCGGCGTGCC 5643 Query 79490 ACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACC 79549 ||||||| || ||||| ||||| | || |||||| ||| || |||| |||||| | Sbjct 5642 ACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTTGCCACCTTGGTCGACGTAGC 5583 Query 79550 GGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGTTCGTCC 79609 | || ||||||||| | || ||||||||||| || ||||||| | | ||||||||| | Sbjct 5582 GCGCGGTGTTGTTGTAGACACGGAGCATGGGGACAATGCCGTTCGAGTAGCCGTTCGTGC 5523 Query 79610 CGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACC 79669 || ||| | ||| |||| || ||||| | | | ||||| || |||| Sbjct 5522 CGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAACCGATACCACCGGCGG 5463 Query 79670 ACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCT 79729 |||||||||| |||||||| ||| ||||| ||||| ||||| || ||||| || |||| Sbjct 5462 TCTTGGAGATGAGCGCGCACGTCTTAAGCGTGTCGTAAATGCCTTCAATCGAATCATCCT 5403 Query 79730 TCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGG 79789 |||| | ||||||||| ||| ||| | ||| |||| ||| |||||||||||||| | Sbjct 5402 TCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCG 5343 Query 79790 TCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTGACGCGCG 79849 |||||| ||||| || ||| | | | ||| || | ||||| || | ||||||| Sbjct 5342 TCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCT 5283 Query 79850 GGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTG-GGGCGTCTCG 79908 | ||||| |||||||||||||| ||||| ||||||| | || || |||||| ||| Sbjct 5282 CAATGTCGTGACCGTGGATGCCGACGGCGACACGCATGAGCATGTGTTGCGGGCGT-TCG 5224 Query 79909 CCGACATT 79916 |||| || Sbjct 5223 GCGACCTT 5216 Score = 143 bits (158), Expect = 3e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 ||| || || ||||| ||||||||||||||||| || || ||||||| ||||| | ||| Sbjct 7163 GGCCCGCGTGCGCAAGTAGTACATGCCCGTCTTCAGTCCTCTCTTCCAGCCGTAGAAGTG 7104 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| || |||| |||| | ||| || || | |||||| ||||| || ||||| Sbjct 7103 CATCGACGTGAGCTGCGCCATCGTTGGGCTCGACAAGTGGATGTTAAGCGATTGCGACTG 7044 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCA 78362 ||| ||| | ||||| |||||||| | || |||||| | | |||||||| | |||||| Sbjct 7043 GTCAATGAAGGCACCTCGGTCGGCGGACAAGTCGATAATAGTCTTTTGCGAGAGCTCCCA 6984 Query 78363 GATGGTCCGGTAAATGGCCTTCAGCTC 78389 || |||| ||| |||||||| || || Sbjct 6983 GACGGTCTTGTAGATGGCCTTGAGATC 6957 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20618 CTCAAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCG 20677 ||||||| ||| |||| |||||| ||||| || | || |||| || |||||| || | Sbjct 6960 CTCAAGGCCATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGACTTGTCC 7019 Query 20678 GCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCG 20737 ||||| || || |||| ||| |||||||| || ||||| || || | || || || Sbjct 7020 GCCGACCGAGGTGCCTTCATTGACCAGTCGCAATCGCTTAACATCCACTTGTCGAGCCCA 7079 Query 20738 AGCCTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGC 20797 | ||||| |||| | || ||||| | ||||||||| | | || || ||||||||| Sbjct 7080 ACGATGGCGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGAGAGGACTGAAGACGGGC 7139 Query 20798 ATGTACTATCTGCGGACCCGAGCC 20821 |||||||| |||| || || ||| Sbjct 7140 ATGTACTACTTGCGCACGCGGGCC 7163 >seq2799 Length=114060 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 60024 GGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTC 60083 ||||||||| | | || ||||||||||| ||||||||| | ||||| || ||| ||| Sbjct 52404 GGCTCGTTCGCTTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCCGGATTGACCTTC 52345 Query 60084 TCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 ||||||||||| || || || |||||||||||||| Sbjct 52344 TCCAACGAGCTCATCTCGCGTGACGAGGGCCTCCA 52310 >seq2633 Length=102433 Score = 86.0 bits (94), Expect = 7e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 60020 CTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAG 60079 ||| ||||| ||| | || || ||||||||||| || ||||||||||| ||||| Sbjct 28297 CTCAGGCTCCTTCGCCTCCATCTTTTGGCTCAAAAAACGAGGCCTCATGCCTGGCCTCTC 28238 Query 60080 TTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCAT 60119 ||||||||||||||| || ||||| ||||| || || ||| Sbjct 28237 TTTCTCCAACGAGCTCATATCCCGCGACGAAGGTCTTCAT 28198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548492005073520