Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011535.1_202016-07-08] 4,783 sequences; 26,146,073 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2433 187 5e-42 seq1217 187 5e-42 seq2090 179 8e-40 seq2875 176 9e-39 seq2148 158 3e-33 seq2446 89.7 1e-12 seq2279 86.0 1e-11 >seq2433 Length=109699 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || ||||||||||| || || Sbjct 39399 ACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGC 39340 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || || ||||| | |||||||||||| || Sbjct 39339 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGG 39280 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| || |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 39279 AATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 39220 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||||| ||||| || || |||||||| Sbjct 39219 CTCGAGCGTGATCGTCTTGCCCGTCAGCGTCTTGACAAAGATCTGCAT 39172 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || ||||| ||||| || || Sbjct 39171 ACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAATCGGC 39112 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || || |||||||| || || ||||| || Sbjct 39111 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGG 39052 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| | || ||| | ||||| |||||||| | ||||| Sbjct 39051 AATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 38992 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||| | ||||| || || |||||||| Sbjct 38991 CTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 38944 Score = 168 bits (186), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | ||| || || ||||||||||| || || Sbjct 39627 ACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGC 39568 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || |||||||| || || ||||| || Sbjct 39567 GAGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGG 39508 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| || ||||| | || ||| | ||||| |||||||| | ||||| Sbjct 39507 AATGCCTTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGAC 39448 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| ||||| | ||||| || || |||||||| Sbjct 39447 CTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 39400 >seq1217 Length=66466 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || |||| || | ||| || || ||||| ||||| || || Sbjct 122 ACCACCTCGGAGACGGAGAACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGC 181 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||||||||||||||| || || || || ||||||||||| || || ||||| || Sbjct 182 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGG 241 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||||||||||||||| || || ||| | ||||| |||||||| | ||||| Sbjct 242 AATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 301 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || |||| ||||| ||||| || ||||| Sbjct 302 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 349 Score = 109 bits (120), Expect = 1e-18 Identities = 90/110 (82%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 282990 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCG 283049 ||||| |||||||||||||||||||| || || ||| | ||||| |||||||| | ||| Sbjct 12 GGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCG 71 Query 283050 ACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || |||||||| || |||| ||||| ||||| || ||||| Sbjct 72 ACCTCGAGCGTAATCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 121 >seq2090 Length=47937 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || |||| || | || || ||||||||||||||||| || Sbjct 3842 ACCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGC 3901 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | |||||||||||||| || || || ||||||||||| | |||||| ||||| ||| Sbjct 3902 CAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGG 3961 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||||||||||||||| | || ||| | ||||| ||||| || | ||||| Sbjct 3962 GATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGAC 4021 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCA 283098 ||||| ||||| ||||| ||||| | ||||| || || || |||| Sbjct 4022 CTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 4068 >seq2875 Length=107407 Score = 176 bits (194), Expect = 9e-39 Identities = 174/225 (77%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || ||||| || |||| || | || || ||||||||||||||||| || Sbjct 55318 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 55259 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | |||||||||||||| || || || ||||||||||| | |||||| ||||| ||| Sbjct 55258 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 55199 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| | || ||| | ||||| ||||| || | ||||| Sbjct 55198 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 55139 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097 ||||| ||||||||||| ||||| | |||||| || || || ||| Sbjct 55138 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 55094 >seq2148 Length=14236 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || |||| || | ||| || || ||||| ||||| || || Sbjct 253 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 194 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||||||||| || || || || || |||||||| || || ||||| ||| Sbjct 193 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGGA 134 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| || ||||| || || || | ||||| || ||||| | ||||| Sbjct 133 ATGCCCTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATCGTATCCGACGACTCGACC 74 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || |||| ||||| ||||| || ||||| Sbjct 73 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 27 >seq2446 Length=41889 Score = 89.7 bits (98), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 316183 TAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGATGATCCTCGATGTGGTGGAAA 316242 |||||||| ||||||||||| | | |||| | || || || |||||||| |||||||| Sbjct 15020 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATATGGTGGAAC 15079 Query 316243 GCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGCTTC 316284 ||||| || |||||||| || | ||||| || || |||||| Sbjct 15080 GCGTGTTGGGCCACGTACGCGACACGCAAGTTGGGGTGCTTC 15121 >seq2279 Length=46235 Score = 86.0 bits (94), Expect = 1e-11 Identities = 432/679 (64%), Gaps = 12/679 (2%) Strand=Plus/Minus Query 273516 TTGAAACCTTTGTACCACGGCTTCATGGCTACCATAGGTTCACCCTTCATCAGTCGCTCC 273575 ||||| || |||||| || | ||| | | |||| ||||| ||||| ||| Sbjct 34907 TTGAATCCACGGTACCAAGGGTGCATCGGTTCCATCTCCTCACCTCTCATCTTGCGCCTT 34848 Query 273576 ACATTACCAATAATATCTTTAGGGTTGTAACTCGGAACGTTCGTAGACCAACCGGTGCCA 273635 | || | | |||||| | ||||||||| | || || | | ||| || || ||| Sbjct 34847 AAGTTGGCCACAATATCCGTCGGGTTGTAATTGGGCACCGATGAACTCCATCCCGTTCCA 34788 Query 273636 ATACCGGAAGAACCATTCACCAGAATACTCGGGATAATTGGGACATAATATTCGGGCTCA 273695 ||||| || ||||| |||| | | ||||| || |||| || | ||||| Sbjct 34787 ATACCCTCCGAGCCATTGACCAAAGCCATGGGGATGATGGGGATGTACCAAGACGGCTCG 34728 Query 273696 ATTTTATCACCATCGTCGTAAAGGTACTTCAACAAAGCA-TCATCCGTATCAACGAAAAC 273754 || | | ||||| |||| ||||| ||| | | || ||||| | | ||| || Sbjct 34727 ATGCTTTGCCCATCATCGTTGAGGTA-TTCGAGCACGCTGTCATCAGCGGGATGGAAGAC 34669 Query 273755 CTTTCGCGTCT--GAGGATTCAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTG 273812 | ||||| || ||| | |||||||| ||||| | || || ||| || Sbjct 34668 GCTACGCGTGATGGATGATACG--TTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTA 34611 Query 273813 CCACCTTGCAGCCTCGAACCAAACTGACC-CTCGGGCAGTAGCCAGTTTATGTTGTTGCT 273871 ||||||||||| | || |||||| ||||| ||||| | || ||| | ||||||| Sbjct 34610 CCACCTTGCAGACGCGTACCAAATTGACCGTTCGGGTCG-AGAATGTTGAGGTTGTTGGA 34552 Query 273872 ACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTG 273931 |||||| | | || |||| | ||| || || || | | || ||||| || Sbjct 34551 CCCGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCACCGTGATG 34492 Query 273932 ATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTTCACATCGCTCGTCAA 273991 || || ||| ||||||| ||||| | || || | ||||| | || |||||| Sbjct 34491 GTACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAA 34432 Query 273992 GTTTCGCTTGAA--TGCGGAATACAACACCTTCCGCTGCGAGGGCTTGAACCCATCAACG 274049 || |||||||| | || |||| ||||| || || ||||| |||||||||| | Sbjct 34431 CTTGCGCTTGAAGCAACCGA--ACAAGACCTTGCGTTGACCCGGCTTAAACCCATCAATG 34374 Query 274050 ACCGATGGAATACTGCGTTCCAAATCATACCGAGAGAACAAAATCAGTTCCTTGTCAATG 274109 || || |||||| ||| | || | ||||| | |||| ||||||| ||| Sbjct 34373 ACAGAGGGAATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATG 34314 Query 274110 AAGTCAGGGACGGGAACCTCGGGCTTCTTGTGGTCGAGCTGATTACCGGGTTCGTATGCC 274169 || || || || || |||| | |||||||||| | | ||||| || | | Sbjct 34313 AAATCCTCGATCGGGACTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGACGAAGCCT 34254 Query 274170 AACATCCACTCCTTGCGGT 274188 | ||| |||||||||| Sbjct 34253 CGGAGCCATTCCTTGCGGT 34235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046675053532082