Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900011535.1_202016-07-08] 4,783 sequences; 26,146,073 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1217 147 2e-30 seq2148 143 2e-29 seq2433 141 7e-29 seq2090 127 1e-24 seq2875 125 5e-24 >seq1217 Length=66466 Score = 147 bits (162), Expect = 2e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| ||||| |||||| ||||| |||||||||||||| ||| | || || Sbjct 141 ACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCG 200 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || ||||||||||| |||||||| |||| ||| | || ||||| || Sbjct 201 AGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGG 260 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||| | ||| || ||||| | ||| |||||||| Sbjct 261 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 320 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || |||||||| |||||||||||||| Sbjct 321 CCGGTCAGGGTCTTGACGAAGATTTGCAT 349 >seq2148 Length=14236 Score = 143 bits (158), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| |||| || | | ||||| ||| ||||| |||||| ||||| ||||||||||| Sbjct 254 TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGC 195 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 ||| ||| | || || |||||||| || || |||||||| |||||||| |||| ||| Sbjct 194 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGAGG 135 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287 | || ||||| ||| ||||| ||| || ||| | || || || | || || Sbjct 134 AATGCCCTCCTTGTCCTGAATCTTAGCCTTGACATTGT--CGATCGTATCCGACGACTCG 77 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||| |||||||| || || |||||||| |||||||||||||| Sbjct 76 ACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 27 >seq2433 Length=109699 Score = 141 bits (156), Expect = 7e-29 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | || ||||| ||| ||||| |||||| ||||| |||||||| Sbjct 39174 CATACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAATC 39115 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 |||||| ||| | || || |||||||| || || |||||||| |||||||| |||| Sbjct 39114 GGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGG 39055 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | |||||||| ||| ||||| ||| | | | || ||||| | ||| || Sbjct 39054 GGGAATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTC 38995 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||| |||||||| ||||| || ||||| || ||||| ||||| Sbjct 38994 GACCTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 38944 Score = 132 bits (146), Expect = 3e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 || ||||| ||| ||||| |||||| |||||||||||||| ||||| || | || Sbjct 39612 CAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTACGGCCATC 39553 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || |||||||| || || |||||||| |||||||| |||| || | |||||||| || Sbjct 39552 CTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 39493 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | ||||| ||| | | | || ||||| | || || ||||| | ||| ||||| Sbjct 39492 CTGAATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGT 39433 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| || ||||| || ||||| ||||| Sbjct 39432 CTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 39400 Score = 129 bits (142), Expect = 4e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | || ||||| ||| ||||| |||||| |||||||||||||| Sbjct 39402 CATACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATC 39343 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 |||||| ||| | || || |||||||| || || ||||| | ||| || || |||| Sbjct 39342 GGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGG 39283 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || ||||| ||| ||||| ||| | | | || ||||| | ||| || Sbjct 39282 GGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTC 39223 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| | ||| |||||||| ||||| || ||||| || ||||| ||||| Sbjct 39222 GACCTCGAGCGTGATCGTCTTGCCCGTCAGCGTCTTGACAAAGATCTGCAT 39172 >seq2090 Length=47937 Score = 127 bits (140), Expect = 1e-24 Identities = 153/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||||||||||||||| ||||| | ||| | || || Sbjct 3861 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 3920 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | ||| ||||| |||| || | |||||||| || Sbjct 3921 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 3980 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||||| || || ||||| | || || ||||| Sbjct 3981 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTG 4040 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCA 44336 |||||||||||||| || |||||||||| Sbjct 4041 CCCGTGAGGGTCTTGACAAAGATTTGCA 4068 >seq2875 Length=107407 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||||||||||||||| ||||| | ||| | || || Sbjct 55300 ACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCG 55241 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | ||| ||||| |||| || | |||||||| || Sbjct 55240 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGG 55181 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||||| || || ||||| | || |||||||| Sbjct 55180 ATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 55121 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340 ||||| || ||||| || ||||||||| |||| Sbjct 55120 CCCGTAAGAGTCTTGACAAAGATTTGCCTGAT 55089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359969415147111