Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900012385.1_202016-07-08] 4,708 sequences; 27,248,364 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3347 116 5e-21 seq1708 105 1e-17 >seq3347 Length=202498 Score = 116 bits (128), Expect = 5e-21 Identities = 176/243 (72%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || |||| | |||||| |||||| |||| || |||||||| | ||||||| | || ||| Sbjct 61754 ATCTGGGCACAGTACAAGAAGGCTGAGGCATCTTTTTGGACCGCCGAAGAGATGGACCTG 61813 Query 125079 TCCAAGGACCTGTACGATTGGGA-GACTCGTTTGACTGAAACTGAGCGAGAGTTTATATC 125137 ||||||||| || |||| ||||| || | | | || ||||| | || || || Sbjct 61814 TCCAAGGACATGCACGACTGGGACAACAAGCTCAAGCCCGAC-GAGCGCTACTTCATCTC 61872 Query 125138 GCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACG 125197 |||| | | ||||| || |||| |||||| || ||||||||||| || || | || Sbjct 61873 GCACGTCCTCGCCTTTTTCGCCGCCTCCGACGGCATCGTCAACGAGAACTTGGTCGAGCG 61932 Query 125198 ATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCAT 125254 ||||||| ||| | ||| || | |||| ||| ||||| ||||| || |||||||| Sbjct 61933 ATTCTCTGGTGAG--GTCCAGTCAGCCGAGG-CTCGATGCTTCTACGGTTTTCAAATCAT 61989 Query 125255 GAT 125257 ||| Sbjct 61990 GAT 61992 >seq1708 Length=10279 Score = 105 bits (116), Expect = 1e-17 Identities = 134/181 (74%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 98037 ATCTACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGA 98096 ||||||||||| ||||||||| | || ||||| | ||||| || | |||||| || Sbjct 5859 ATCTACAAGACCGTCTGGGAGCTCTCGCAAAAGACTATTATCGACTTGTCCGCCGACCGA 5800 Query 98097 GGTGTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGT 98156 |||| || |||||||||| |||||| | || | || ||| |||||||| | | | Sbjct 5799 GGTGCCTTCATTGACCAGTCGCAATCGCTTAACATCCAC-TTGTCGAGCCCAACGA-TGG 5742 Query 98157 CGTA--TGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACT 98214 || | | || ||||| ||||| |||| ||||| | || || |||||||||||||||| Sbjct 5741 CGCAGCTCACGTCGATGCACTTCTACGGCTGGAAGAGAGGACTGAAGACGGGCATGTACT 5682 Query 98215 A 98215 | Sbjct 5681 A 5681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741015588666080