Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900012385.1_202016-07-08] 4,708 sequences; 27,248,364 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq1448 201 2e-46 seq1851 188 1e-42 seq2629 178 2e-39 seq4035 170 4e-37 seq2379 163 5e-35 seq3483 161 2e-34 seq1952 154 3e-32 seq3347 113 8e-20 seq726 102 2e-16 seq2937 87.8 3e-12 >seq1448 Length=38548 Score = 201 bits (222), Expect = 2e-46 Identities = 299/419 (71%), Gaps = 4/419 (1%) Strand=Plus/Plus Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305 ||| | ||| ||||||| | ||||| ||||| || || |||||||| ||||| || Sbjct 25821 CTGCATCATCCTCCACATACCCTCGACGTAGTCGGCGGCGTGTCCCCAATCACGCTTGGC 25880 Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGC 268364 ||||| || |||||| | ||||| | ||| | |||||| | | || || | | | | Sbjct 25881 CTCCATATTGCCGAGGTAGAGGCAGTCCTGTTGACCGAGCGAGATCTCG-GCGACAGCTC 25939 Query 268365 GAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGA 268424 | | || || | || || || || ||||| | ||| |||||||||||| | || Sbjct 25940 GGGAAATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAACAAGA 25999 Query 268425 TGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAA 268484 | |||||||||||| ||||||| || ||||| ||||||||| ||| ||||||| || Sbjct 26000 TACCGTTGCACGCGTACATGCCGTACGCCTCGCGGTAGTTCTTGACGATCCAGTAGGCGT 26059 Query 268485 ACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGA 268544 ||| ||| || ||| |||| || ||||| || | |||||||||||| ||||||| Sbjct 26060 ACAACTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCGGATTGAGGGG 26119 Query 268545 TTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTT 268603 | || ||| ||||| | | |||||| ||||| ||||||||||| | || || Sbjct 26120 TCTCGACGACCTTGCCGTACAACTCGGAAGTCGAGGCTTGGTAGAAGCGGACGTGCTTGG 26179 Query 268604 TCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662 || || || ||| ||||||| || ||||| | ||| || ||||| | || || ||||| Sbjct 26180 TCAAG-CCACAGGTTCGGATCGCGTCGAGGAGACGCAGTGTTCCAAGACCGTCGACGTC 26237 >seq1851 Length=41480 Score = 188 bits (208), Expect = 1e-42 Identities = 283/397 (71%), Gaps = 4/397 (1%) Strand=Plus/Plus Query 268268 TCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGG 268327 || || || || || || || |||||||| ||||| || |||||||| |||||| | ||| Sbjct 36197 TCAACGTAATCGCGGGCGTGTCCCCAATCACGCTTGGCCTCCATGTTACCGAGGTAAAGG 36256 Query 268328 CATTTCTGCTTGCCGAGCTTCA-CGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAA 268386 || | ||| | |||||| | | || || | |||| | ||| |||| || ||||| Sbjct 36257 CAATCCTGTTGACCGAGCGAGATCTCG-GCGACGGCGCGTGAGATCTTTCTCGTGACGAA 36315 Query 268387 CGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCC 268446 || |||||| | ||| |||||||||||||||||| |||||||||||| ||||| | Sbjct 36316 GGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCGTTGCACGCGTACATGTC 36375 Query 268447 ATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGG 268506 || | ||| ||||||||| ||| ||||| | || ||| ||| || ||| |||| || Sbjct 36376 GTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAACTTGGCGACTCCGTAGGG 36435 Query 268507 AGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAG 268566 ||||| || | |||||| ||||| |||||| | || || ||||| | | Sbjct 36436 CGAACGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCGACAACCTTGCCGTACAA 36495 Query 268567 CTCGGAGGTCGATGCTTGGTAGAA-CTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTG 268625 ||| |||||||| || |||||||| | || || || || ||||| | ||||| | Sbjct 36496 CTCCGAGGTCGAGGCCTGGTAGAAGCGGACGTGCTTGGTCAAG-CCGCAAGTGCGGATGG 36554 Query 268626 CCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTC 268662 | ||||| | ||| || ||||||| || || || || Sbjct 36555 CGTCGAGGAGACGGAGTGTTCCCAGACCGTCAACATC 36591 >seq2629 Length=47894 Score = 178 bits (196), Expect = 2e-39 Identities = 175/226 (77%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| ||||||||||| || |||| Sbjct 3827 CCACCACGCAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 3886 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| ||||| || ||||| | ||| ||||| || || Sbjct 3887 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 3946 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| | ||||||| ||||| ||||| | || || || Sbjct 3947 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 4006 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 || | ||||||||| || ||||||||||||||||| || || |||| Sbjct 4007 TCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 4052 >seq4035 Length=102862 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| ||||| ||||| || |||||||| ||||| | | Sbjct 69756 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCG 69815 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | || || ||||| || ||| Sbjct 69816 AGCGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGA 69875 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| |||||||| | ||||||| ||||| ||||| | || || || Sbjct 69876 ATGCCTTCCTTGTCCTGAATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGACC 69935 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || ||||| || |||||||| || |||||||| Sbjct 69936 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 69982 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| ||||| ||||| || ||||| || ||||||| | Sbjct 70212 CCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 70271 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || | || || ||||| || ||| Sbjct 70272 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGA 70331 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| || ||||| | ||||||| ||||| ||||| | || || || Sbjct 70332 ATGCCTTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGACC 70391 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || ||||| || |||||||| || |||||||| Sbjct 70392 TCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 70438 >seq2379 Length=107647 Score = 163 bits (180), Expect = 5e-35 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||||| ||||||||||| || |||| Sbjct 52253 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 52312 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||| || | |||||| ||||| || ||||| | ||| ||||| || || Sbjct 52313 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 52372 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| | ||||||| ||||| ||||| | || || || Sbjct 52373 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 52432 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || | |||||| || || ||||| || |||||||| || || ||| Sbjct 52433 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 52477 >seq3483 Length=101781 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| ||||| ||||| || ||||| || ||||||| | Sbjct 107 CCACCTCGGAGACGGAGAACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 166 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || | || || ||||| || ||| Sbjct 167 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGGA 226 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| ||||| ||||||||| ||||| ||||| | || || || Sbjct 227 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 286 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || |||||||||||||| || ||||| Sbjct 287 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 333 >seq1952 Length=10294 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 ||| || || || || | |||||||| ||||| ||||| || ||||| || ||||||| Sbjct 10057 TCCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGC 10116 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 ||| || | ||||| || | |||||| || || || || | || || ||||| || || Sbjct 10117 GAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGG 10176 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||||| |||||||| |||||||| |||||||| ||||| || || | || || || Sbjct 10177 AATGCCCTCCTTGTCCTGAATCTTAGCCTTGACATTGTCGATCGTATCCGACGACTCGAC 10236 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || |||||||||||||| || ||||| Sbjct 10237 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 10284 >seq3347 Length=202498 Score = 113 bits (124), Expect = 8e-20 Identities = 126/164 (77%), Gaps = 6/164 (4%) Strand=Plus/Minus Query 9937 TGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGA 9996 |||| |||| ||| ||||| ||||| || || |||||||||||| | ||||||||||| Sbjct 62970 TGAC-CCCGACTTTTGGTAATCCGAAACACGCTTCTCGAAGAAGTTTGTCTTGCCCTCGA 62912 Query 9997 GGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCG--CCAAACTGCTTGGGGTAACC 10054 | || || | | ||| ||||||||||||||||||||| ||| || |||||||| || Sbjct 62911 GCGAGATCATATTCATAAAGTCAAAGGGGTTCTCGGCGTTCCAGAC--CTTGGGGTTGCC 62854 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTA-CTGG 10097 | || || | ||||| || |||||||||||||| |||| Sbjct 62853 CAAGGCGACCAACAATCGGTCGGCGACGAACTCGATGTATCTGG 62810 >seq726 Length=41968 Score = 102 bits (112), Expect = 2e-16 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || ||||||||||||||||| | | ||| | || ||||| | ||| ||||||||||| Sbjct 26912 TAACGCCACTGGATGTACTGCATCGCCGTCTTCTCGAGGTGCTCCTCGATATGGTGGAAC 26853 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTC 225097 || || ||||| |||||||| | |||| |||||| |||||| || | || ||| Sbjct 26852 GCGTGTTGGGCCACGTACGCGACACGCAAGTTGGGGTGCTTCTCAACCTTG-CCTTCGTC 26794 Query 225098 -GGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCC 225156 ||| | |||||| || | || |||||| || || | || || ||||| |||||||| Sbjct 26793 GGGTACGGTCTCGCCCGTCAAGAGCTTGATCAGGGTCGATTTACCGGCACCGTTGGGGCC 26734 >seq2937 Length=37933 Score = 87.8 bits (96), Expect = 3e-12 Identities = 447/710 (63%), Gaps = 2/710 (0%) Strand=Plus/Plus Query 175975 CCTTGAACCCCCGATACCAAGGGGTCATTGGGAGCATCGTCTCGTTGTTAATGAGGCGCT 176034 ||||||| || || ||||||||| ||| || |||| ||| | || |||| Sbjct 11311 CCTTGAATCCACGGTACCAAGGGTGCATCGGTTCCATCTCCTCACCTCTCATCTTGCGCC 11370 Query 176035 TCACATTGTCTACGATATCCTTGGGGTTGTAAGCCGGAATGTTAGTGCTAAATCCTGTTC 176094 | | ||| | || |||||| | ||||||||| || | | || |||| |||| Sbjct 11371 TTAAGTTGGCCACAATATCCGTCGGGTTGTAATTGGGCACCGATGAACTCCATCCCGTTC 11430 Query 176095 CTATTCCTGACGATCCATTCACCAGGAGAAACGGGATGGTGGGAACATAGTATTCCGGTT 176154 | || || ||| ||||| |||| | |||||| |||| | || | ||| | Sbjct 11431 CAATACCCTCCGAGCCATTGACCAAAGCCATGGGGATGATGGGGATGTACCAAGACGGCT 11490 Query 176155 CAATCCGGTCGCCGTCATCCTCGAGGTAGTTCAGCAGACGCTCGTCGGCCTTGTGGAAAA 176214 | || | | || ||||| | |||||| | |||| | || || || ||||| | Sbjct 11491 CGATGCTTTGCCCATCATCGTTGAGGTATTCGAGCACGCTGTCATCAGCGGGATGGAAGA 11550 Query 176215 TATCCCGGGTGTTGGGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGC 176274 || ||| ||| || | | |||||||| || | ||| || || ||| || | Sbjct 11551 CGCTACGCGTGATGGATGATACGTTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTAC 11610 Query 176275 CTCCGTGAAGGCGGGAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAAC 176334 | || || || || | ||| ||||| ||| || || | |||| ||| || || | Sbjct 11611 CACCTTGCAGACGCGTACCAAATTGACCGTTCGGGTCGAGAATGTTGAGGTTGTTGGACC 11670 Query 176335 CCACGTAGTCTTGGGCCATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGAT 176394 | ||| | | ||| |||| |||| |||| ||| || | | | || ||||| || | Sbjct 11671 CGACGAACTGTTGCGCCAGGCCGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGT 11730 Query 176395 AGCCGGCGTTCTCACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTACGAGGT 176454 | | | || ||| ||| ||| | || || |||| ||||| || || | | Sbjct 11731 ACGCCGAGTGCTCGGCGACGTAACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACT 11790 Query 176455 TGCGCTTCAACGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACGACCG 176514 ||||||| || ||||| | ||| || || ||||| | ||||| | ||| | Sbjct 11791 TGCGCTTGAAGCAACCGAACAAGACCTTGCGTTGACCCGGCTTAAACCCATCAATGACAG 11850 Query 176515 ACGGAATGGAACGCTCTACATCGTATCTTGAAAAAAGGATAAGGTCTTTGTTTATGAAAT 176574 | ||||| || ||| | ||| | || || ||||| | || ||||| ||||||| Sbjct 11851 AGGGAATAGAGCGCACGTTGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATGAAAT 11910 Query 176575 CCTCCACTGGAATCTTC-GTGAGCTTCTGGTCGAGCTGGTTGCCAGGCTCGAAATCAAGG 176633 |||| | || | |||| | || | |||||||| | |||| || |||| | || Sbjct 11911 CCTCGATCGGGA-CTTCGGCGATGCTGTGGTCGAGGTACGTGCCGGGGACGAAGCCTCGG 11969 Query 176634 AGCCACGTCTTCCGTTCGTCCGCCCGAGACTTGTTGAAAGACTTGTCAAT 176683 ||||| ||| || | ||| ||| ||||||||| | | |||| || Sbjct 11970 AGCCATTCCTTGCGGTTGTCGGCCTTCTTCTTGTTGAAGGCCATGTCGAT 12019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921568162521760