Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900012385.1_202016-07-08] 4,708 sequences; 27,248,364 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq4035 114 1e-20 >seq4035 Length=102862 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||||||||| || ||||| || || || || ||||| |||||||| | || || Sbjct 69767 ACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTACGGCC 69826 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || ||||| || | ||||||| ||||| || || ||||| || || || Sbjct 69827 ATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTT 69886 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || ||| || || ||||| | || | ||||| || || || || || || | Sbjct 69887 GTCCTG-AATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 69945 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || | || || ||||| |||||||| Sbjct 69946 TCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 69982 Score = 109 bits (120), Expect = 4e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||||||||| || ||||| || || || || || || ||||| || | ||||| Sbjct 70223 ACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCC 70282 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || |||||||| | ||||||| ||||| || || ||||| || || || Sbjct 70283 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTT 70342 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 ||| || || || || ||||| | || | ||||| || || || || || || | Sbjct 70343 GTCCTG-GATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 70401 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || | || || ||||| |||||||| Sbjct 70402 TCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 70438 Score = 100 bits (110), Expect = 2e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||||||||| || ||||| || || || || ||||| ||||| || | ||||| Sbjct 69995 ACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCC 70054 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || |||||||| | || | | ||| || || || ||||| ||||| || Sbjct 70055 ATCCTCGAGCTGCTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTT 70114 Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 || || || || || ||||| | || | ||||| || || || || || || | Sbjct 70115 ATCCTG-GATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGA 70173 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || | || || ||||| |||||||| Sbjct 70174 TCGTCTTGCCCGTCAGCGTCTTGACAAAGATCTGCAT 70210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385197096603828