Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq16 105 1e-17 >seq16 Length=1730088 Score = 105 bits (116), Expect = 1e-17 Identities = 669/1050 (64%), Gaps = 57/1050 (5%) Strand=Plus/Minus Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798 ||||||||||| || | || || |||||||||||| ||||| | || ||||| Sbjct 585465 TTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTACCACCTTGCAGACGCGTACCAAAT 585406 Query 281799 TGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGT 281856 ||||| | ||| | | || ||| | ||| ||| ||||||| | | || |||||| Sbjct 585405 TGACCGTTCGGGTCGAGAA--TGTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAGGC 585348 Query 281857 TGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACAT 281916 || ||| || || || | | |||||||| || || || ||| ||||| || | Sbjct 585347 CGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGTACGCCGAGTGCTCGGCGACGT 585288 Query 281917 AACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---T 281973 |||| | || ||| | ||||| | || ||||| ||||| ||||| |||| Sbjct 585287 AACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACTTGCGCTTGAA---GCAACCGA 585231 Query 281974 ATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCA 282033 | || || || |||||| ||||| || ||||||| |||||| ||||| ||| | Sbjct 585230 ACAAGACCTTGCGTTGACCCGGCTTAAACCCATCAATGACAGAGGGAATAGAGCGCACGT 585171 Query 282034 GGTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGT-CGGGAACGGGAACCTCG 282092 ||| | |||||| | || | ||||||| ||||| | | || |||| || ||| Sbjct 585170 TGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATGAAATCCTCGATCGGG-ACTTCG 585112 Query 282093 GGCTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTATGCCGTC--ATCCACTCCTTGCGAT 282150 | | ||||||| || | | || || || | ||| || | ||| |||||||| | Sbjct 585111 GCGATGCTGTGGTCGAGGTACGTGCCGGGGACG-AAGCC-TCGGAGCCATTCCTTGCGGT 585054 Query 282151 CCTCGGCCCGAGTCTTGTTGAAAGAACGATCGATGAGCTC-------TCCAGAATCAGAA 282203 |||||| |||||||||| | ||||| ||||| ||| | || ||| Sbjct 585053 TGTCGGCCTTCTTCTTGTTGAAGGCCATGTCGATCAGCTCGCGCTCTTCCTGCGTC-GAA 584995 Query 282204 GTCCACGTAAACGTCTTCATAAGAGTCTTCAGGTTGCTGAAGTAATGCTTG---GCATCA 282260 | | |||| | | | | | || ||||| ||||| |||| || || Sbjct 584994 GGGC---GGAACGGCAAGCGATGCTTGTCCATGTTGCCAAAGTA---CTTGACCGCGTCC 584941 Query 282261 GTGCTGGAACTCGTACCGAGACCCTTGTAATACTTGATTTGATACTTAGAATAATCCTTC 282320 || | ||||||||| | |||||| | |||||||| | | | | || || Sbjct 584940 CTGGCGTCACTCGTACCCAATCCCTTGAAGTACTTGATGCGCCATCCACGA----CCGTC 584885 Query 282321 GT-GGTC---TTCACCCAATCCTCGTAATCCGGAAGACTATAAAATTCGCGAACGTCCT- 282375 | |||| | | ||| | |||||| | |||| | ||||| | ||| |||| Sbjct 584884 ATCGGTCACTTCCTTCCAGTGCTCGTACTGAGGAATTGTGAAAAAT--GACAAC-TCCTT 584828 Query 282376 -TTCCTTTCTTGG-CGAC--CACGATAGGTGTGATGAACTTCTTCAAGAAACCTGGAATT 282431 |||| ||||| || | ||||| || ||||| |||| |||||| || | Sbjct 584827 GTTCC--CCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAGCAAGAAGCCCTTCAGC 584770 Query 282432 TCTAGGAGACTGGGAAAACAGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTT 282491 | || | || || ||| || || ||||| |||| ||||| |||||| | | Sbjct 584769 TTGAGCAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTAATGTGCGAT 584710 Query 282492 CCGTCAACATCCGCGTCGGTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCT 282551 || || ||| |||| ||||||||| | | ||||| | || || ||| Sbjct 584709 CCATCGTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCG 584650 Query 282552 TTGTACACTTTACCGGTTTGAAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTTC 282611 |||| ||||| || || || ||||| || || |||| ||| || || | || Sbjct 584649 GTGTAAACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGCTTGAATCTCGGCATTG 584590 Query 282612 TTTGTGA-TACTTGCCACAGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAA 282670 | || ||| | | | || || || ||||| |||||||| || || | ||| || Sbjct 584589 TCGAGGAGGGCTTTGC-CCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAA 584531 Query 282671 AACACCATATCTCTCGCGACCGACCACGGACAGTCCTGCAATTGCAAGTG--TTGCTGCG 282728 ||||||||| | || |||||||| || | ||| || | | || || | ||| ||| Sbjct 584530 AACACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTG--GCG 584473 Query 282729 GAATCTCCCTCCGTCAAGATGAGAGTACAC 282758 |||||||| || ||||||||||| || ||| Sbjct 584472 GAATCTCCTTCGGTCAAGATGAGCGTGCAC 584443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823498525310