Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq15 98.7 2e-15 >seq15 Length=1365434 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||||||||| || || | || || | || || || || || || ||| Sbjct 536102 GTCGACTCCTTCTGAATATTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 536043 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || | | ||| || || ||||| || || || || ||||||||||| || || Sbjct 536042 GCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTG 535983 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||||| | || ||||| || ||||| ||||| ||||| || || Sbjct 535982 ACGTTGTCGATCGTATCCGACGACTCGACCTCGAGCGTAATCGTCTTGCCAGTCAGGGTC 535923 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 535922 TTGACGAAGATTTGCAT 535906 Score = 89.7 bits (98), Expect = 1e-12 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| ||||| || || | || || | || || || || || || ||| Sbjct 785098 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCA 785039 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||| || || || || || ||||| || ||||||||||| | || Sbjct 785038 GCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGTCTTG 784979 Query 104483 ACATTTTCTACGGTATCGCTAGG-TTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | || || | ||| || ||||| || || || ||||| || ||||| || Sbjct 784978 ACGTTGTCGATCGTGTC-CGAGGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 784920 Query 104542 TTTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 784919 CTTGACAAAGATCTGCAT 784902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397854165196