Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq28 156 5e-33 seq16 125 9e-24 seq19 89.7 6e-13 >seq28 Length=4051571 Score = 156 bits (172), Expect = 5e-33 Identities = 555/859 (65%), Gaps = 10/859 (1%) Strand=Plus/Plus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 ||||| || |||| || || || | | ||| ||| | | |||||| || || || Sbjct 4026796 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCG 4026855 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || |||| || || ||| || ||||| | |||||||| || || || |||| Sbjct 4026856 GTGCACAGGTTCGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCG 4026915 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || || ||||| ||||| | || | || || || |||| | ||||| || | | Sbjct 4026916 GCGTCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTAC 4026975 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 || | | | ||| | || | || ||||| || ||||||| ||||| || | | Sbjct 4026976 CAAAGCTTTTGCG-CGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 4027034 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 | ||| ||||| || || | | || || || || || | | |||||||| Sbjct 4027035 CAAGGCGCGGAACTCCTCGCCATAGACTTCGTGTAGGCCGGGGGCTTCGGCGGGGCAGAA 4027094 Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828 ||||| ||| | || | |||| ||||||| |||||| || || || |||||||| || Sbjct 4027095 GAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGCGC 4027154 Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888 |||||||||| ||| |||| |||| || | || || || || | |||| || Sbjct 4027155 AAAGAAGAGATCACGAGCGCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 4027214 Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945 || | || || ||||||||||| || ||||| | ||||| | || ||| Sbjct 4027215 TTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 4027274 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 ||| | |||| || || | ||| ||| || | || || ||||| || | || || Sbjct 4027275 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACAATGCC 4027334 Query 115006 ATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATG 115063 | || | ||| || || || ||| || ||| | | || | || | |||||| Sbjct 4027335 GTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCC--GGTCGCGCGGATGTTGTGGATG 4027392 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 || ||| ||||| || || ||| ||||| |||||||| | | || || |||| Sbjct 4027393 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTAAGCGTGTCGTAA 4027452 Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183 || || || ||||| ||| |||| | | || ||||| ||| ||| | || || Sbjct 4027453 ATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCGGGTGA 4027512 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243 || || || ||||||||||| || || | |||||| | || | | |||||| Sbjct 4027513 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATAAGG 4027572 Query 115244 TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 115303 | ||| | || ||||||| |||||| | ||||| || |||| | ||| ||||| Sbjct 4027573 TTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACACGCATG 4027632 Query 115304 AACATGTATTG-GGGTGTT 115321 | ||||| ||| ||| ||| Sbjct 4027633 AGCATGTGTTGCGGGCGTT 4027651 >seq16 Length=1730088 Score = 125 bits (138), Expect = 9e-24 Identities = 294/433 (68%), Gaps = 17/433 (4%) Strand=Plus/Minus Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 172581 ||||||| ||||||| ||| || || | | | ||| | | || ||| || |||||| Sbjct 584823 CCCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAG-CAAGAAGCCCTTCAGCTTGAG 584765 Query 172582 GAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATC 172641 | || || | |||| | || | || | ||| |||||||||||||| || ||||| Sbjct 584764 CAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTAATGTGCGATCCATC 584705 Query 172642 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 172701 || ||| ||| | ||| ||||| ||| || || || ||| | || || || Sbjct 584704 GTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 584645 Query 172702 CTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 172761 | || ||||| || ||||||||||||| ||||| | ||||| ||| || | ||| Sbjct 584644 AACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGC-TTGAA-TCTCGGCAT--TGT 584589 Query 172762 -GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACA 172817 ||| | || | | || || || || || |||| || || | |||||| | Sbjct 584588 CGAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAAA 584529 Query 172818 CACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAAT 172877 |||| |||| || ||||| || |||| ||||| | || ||||| | ||| ||||||| Sbjct 584528 CACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTGGCGGAAT 584469 Query 172878 CACCCTCCGTCACGATGAGCGTACACTTT--CCAGATTGTGCCGTCCCCGCCTTGTTCGC 172935 | || || |||| ||||||||| ||||| || | | | ||| || || |||||||| Sbjct 584468 CTCCTTCGGTCAAGATGAGCGTGCACTTGGACCCGTTCCT--CGTACCAGCGTTGTTCGC 584411 Query 172936 ATCGTCCAACTTG 172948 ||| || | |||| Sbjct 584410 ATCTTCGAGCTTG 584398 >seq19 Length=1040457 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 || || || || |||||||| ||| || || ||| || ||||||| ||| | Sbjct 752797 TACCAGGCCTCGACCTCGGAGTTGTACGGCAAGGTTGTCGAGACCCCTCAGTCCGAGACG 752856 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645 || |||||||| || || || ||| || ||| | ||| | || ||| |||| Sbjct 752857 ACCCCCTTCTACCCTCGTTCGCCCTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCGTC 752916 Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705 ||||| ||||| || || || | | | |||||| |||||| ||||||||||||||| Sbjct 752917 AAGAACTACCGCGAGTCGTACGACATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 752976 Query 8706 TCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATC 8744 || ||||| ||||||| ||||| || | |||||| Sbjct 752977 TCCCCCCGCCGTGGCCGCACCTTCGTCACGAGAAAGATC 753015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353323723960