Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq15 147 2e-30 seq16 141 1e-28 seq28 134 2e-26 >seq15 Length=1365434 Score = 147 bits (162), Expect = 2e-30 Identities = 175/235 (74%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||||| || || | | ||||| ||||| || | || |||||| ||||| ||||| Sbjct 785363 TTATTGACCACCACGGAGACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTA 785304 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||| || ||||| | || |||||||||||||| ||||| ||||| ||||||||||| Sbjct 785303 ATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTC 785244 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCG 46538 | || | || ||||||||| ||||| |||||| ||| | | | |||||| || Sbjct 785243 TGGGGGAATGCCTTCCTTGTCCTGAATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGACG 785185 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || | |||||| || |||||||| ||||| || |||||||| ||||| Sbjct 785184 ACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 785130 Score = 145 bits (160), Expect = 9e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| || | || |||||| ||||| ||||| |||| || ||||| | Sbjct 784889 ACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCC 784830 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || ||||| Sbjct 784829 ATCCTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTT 784770 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| |||||| ||| | | | |||||| ||| || || || | ||||| Sbjct 784769 GTCCTGAATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGA 784711 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || |||||||| ||||| || |||||||| ||||| Sbjct 784710 TCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 784674 Score = 145 bits (160), Expect = 9e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| || | || |||||| ||||||||||| |||| || ||||| | Sbjct 785117 ACGCAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCC 785058 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || |||||||||||||| ||||| ||||| ||||||||||| | || | || ||||| Sbjct 785057 ATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTT 784998 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| |||||| ||| | | | |||||| || || || || | ||||| Sbjct 784997 GTCCTGAATCTTGGTCTTGA-CGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGA 784939 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || |||||||| ||||| || |||||||| ||||| Sbjct 784938 TCGTCTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 784902 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||| | ||||| |||| || |||||| ||||||||||| |||| Sbjct 535904 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 535845 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || |||||||||||||| || || ||||| ||||||||||| | || Sbjct 535844 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGGA 535785 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 46545 | || ||||||||| |||||| ||||| ||| | | | |||||| ||| || || Sbjct 535784 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGAC 535726 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||| || ||||| ||||| || || || ||||||||||| Sbjct 535725 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAGATTTGCAT 535678 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||| | ||||| |||| || |||||| ||||||||||| |||| Sbjct 535676 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 535617 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || |||||||||||||| || || ||||| ||||||||||| | || Sbjct 535616 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGGA 535557 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 46545 | || ||||||||| |||||| ||||| ||| | | | |||||| ||| || || Sbjct 535556 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCGATCGTGTCCGACGACTCGAC 535498 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | |||||| || ||||| ||||| || || || || |||||||| Sbjct 535497 CTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 535450 Score = 129 bits (142), Expect = 7e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||| | ||||| |||| || |||||| || |||||||| |||| Sbjct 536132 CCGCCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGAATATTGTAATCGGCG 536073 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || |||||||||||||| || || ||||| ||||||||||| | || Sbjct 536072 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGGA 536013 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 46545 | || |||||||||| ||||| ||||| ||| | | | ||| || ||| || || Sbjct 536012 ATGCCCTCCTTGTCCTGAATCTTAGCCTTGA-CGTTGTCGATCGTATCCGACGACTCGAC 535954 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||| || || ||||| ||||| || || || ||||||||||| Sbjct 535953 CTCGAGCGTAATCGTCTTGCCAGTCAGGGTCTTGACGAAGATTTGCAT 535906 >seq16 Length=1730088 Score = 141 bits (156), Expect = 1e-28 Identities = 148/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||| | ||||| | || ||||||||||||||||| || Sbjct 1516896 CTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 1516837 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | ||| | || |||||||| |||||| |||||| ||| Sbjct 1516836 GATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGT 1516778 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| ||| || || || | |||||||| |||||||| || || || | Sbjct 1516777 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 1516718 Query 46581 CAAAGATTTGCA 46592 |||||||||||| Sbjct 1516717 CAAAGATTTGCA 1516706 >seq28 Length=4051571 Score = 134 bits (148), Expect = 2e-26 Identities = 146/191 (76%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||| | ||||| | || ||||||||||||||||| || Sbjct 141542 CTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 141483 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | ||| | || |||||||| |||||| |||||| ||| Sbjct 141482 GATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATCTTGGTCTTGA-CGT 141424 Query 46522 CGCC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||||| ||| || || || | ||||| || |||||||| || || || | Sbjct 141423 TGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGA 141364 Query 46581 CAAAGATTTGC 46591 ||||||||||| Sbjct 141363 CAAAGATTTGC 141353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238138577240