Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq19 143 2e-29 >seq19 Length=1040457 Score = 143 bits (158), Expect = 2e-29 Identities = 196/271 (72%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 30114 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACTCTGCTCCGA 30172 || |||||| ||||| ||||| || || || | |||| | |||||||| |||| Sbjct 811068 CAACTGATCGACCCCTTTCCCCTGATAATCATCCTTGGCCGTCC-TATACTCTGCGCCGA 811010 Query 30173 AATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGC 30232 ||||||||||||||||||| || |||||||||| || ||||||||||| || | || | Sbjct 811009 AATGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGACCCAACC 810950 Query 30233 CCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGG 30292 | ||| |||| ||| | ||| || || || | ||||| || || |||||||| |||| Sbjct 810949 CAACCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCCTTGTCGG 810890 Query 30293 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 30352 | | ||| || | || || |||| |||||||| ||||| ||||| | || | Sbjct 810889 ACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCAATGATACCTC 810830 Query 30353 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30383 | ||||||| ||||||| || | ||||| Sbjct 810829 GCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 810799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617415739001