Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq28 178 2e-39 seq37 134 2e-26 seq19 105 8e-18 >seq28 Length=4051571 Score = 178 bits (196), Expect = 2e-39 Identities = 558/858 (65%), Gaps = 15/858 (2%) Strand=Plus/Minus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| || ||||| ||||||| ||||| ||||||||||||| | |||||||| || Sbjct 4027647 CCCGCAACACATGCTCATGCGTGTCGCCGTCGGCATCCACGGTCACGACATTGAGCGCGT 4027588 Query 75271 CTTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 |||| || | ||| || |||||| | | || | ||||| | || || ||||| Sbjct 4027587 CTTGCAGTCGTACAACCTTATGTCCGAGCGCTACTTTACCCACGCCTCGCCGACGCTCTT 4027528 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || || || |||||| | || || ||||| || | | ||||| || Sbjct 4027527 CAACGCCGGAACGCCTCACCCGCAGCTTTCGTCCTGTTTCCTGGTCACGATGAAGGATGA 4027468 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | || || || | || |||| | ||| |||| ||||| ||| || || Sbjct 4027467 TTCGATTGAAGGCATTTACGACACGCTTAAGACGTGCGCGCTCATCTCCAAGACCGCCGG 4027408 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 75508 ||||| || || |||||| | | | || | ||| || ||| || || Sbjct 4027407 TGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGG--CTCCTACATCGCCGGCACG 4027350 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || | || | || ||| | || ||||| || || | ||| ||| |||||||| Sbjct 4027349 AACGGCTACTCGAACGGCATTGTCCCCATGCTCCGTGTCTACAACAACACCGCGCGCTAC 4027290 Query 75569 GTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | |||| || ||||| | || || ||||| ||||| | || || ||| Sbjct 4027289 GTCGACCAAGGTGGCAACAAGCGTCCC---GGAGCCTTCGCGATCTACCTCGAGCCGTGG 4027233 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || ||||| || | || ||||| || | || ||||| || | || || | ||| Sbjct 4027232 CACGCCGACGTCTTCGAATTCCTGGACCTTCGCAAGAACCACGGCAAGGAGGAAGTTCGC 4027173 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 | | |||||||| | | || |||||||| || ||||||||| |||| || |||| Sbjct 4027172 GCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTTTTCATGGAGCGTGTCGAGGCC 4027113 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 | || | ||| |||| ||||| || | | | || || || || ||| | || Sbjct 4027112 GCCGGCGATTGGCCTCTCTTCTGCCCCGCCGAAGCCCCCGGCCTACACGAAGTCTATGGC 4027053 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 |||||||| ||| | | | || || ||| ||||||| | ||||| || | Sbjct 4027052 GAGGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAAGAAAACGATC 4026993 Query 75863 CCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 || || || | | ||||| | || ||||| || | ||| || ||||| | || | Sbjct 4026992 CCCGC-GCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACTGGCAACCCTTT 4026934 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 |||||| ||||| || || |||||||| |||||||||||| | || || ||||| Sbjct 4026933 TATGCTCTACAAAGACGCCGCGAACAAGAAATCGAACCAAAAGAATCTTGGCACGATCAA 4026874 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || || || ||||| || || | |||||| | | ||| ||| || || || Sbjct 4026873 GTCGTCGAACCTGTGCACCGAGATCATCGAGTACTCGGCGCCGGACGAGTGCGCCGTCTG 4026814 Query 76042 CAATTTGGCATCAATCGC 76059 ||| ||||| || ||||| Sbjct 4026813 CAACTTGGCCTCGATCGC 4026796 >seq37 Length=98400 Score = 134 bits (148), Expect = 2e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177747 AATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCC 177806 ||||||| | ||||||||| | ||| || | ||| || ||||||||||| | ||| || Sbjct 57090 AATCTTCCTCGTGACAAAGGTGCGACCACGACGCGGGGACTCGTGGTTGAACAAGATACC 57031 Query 177807 GGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAA 177866 | ||| || ||||| || || | || ||||| || ||||||| ||||| ||| ||| Sbjct 57030 GTTGCACGCGTACATGCCGTACGCCTCGCGGTAGTTCTTGACGATCCAGTAGGCGTACAA 56971 Query 177867 TTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTC 177926 |||| ||| || || || || ||||||||||| ||| ||||| ||| || || || Sbjct 56970 CTTGGCGACTCCGTAAGGCGAACGAGGGTAGAAGGGCGTCGTCTCAGATTGAGGGGTCTC 56911 Query 177927 TCGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 ||| || || ||| ||| ||||| ||||||||||| Sbjct 56910 GACGACCTTGCCGTACAACTCGGAAGTCGAGGCTTGGTA 56872 >seq19 Length=1040457 Score = 105 bits (116), Expect = 8e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 177748 ATCTTCTTTGTGACAAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCG 177807 ||||| | ||||| ||| | || || | || || ||||||||||||||||| ||| Sbjct 753014 ATCTTTCTCGTGACGAAGGTGCGGCCACGGCGGGGGGACTCGTGGTTGAAGAGGATACCG 752955 Query 177808 GAGCAGGCATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAAT 177867 ||| || ||||| | || || || ||||| || ||||||| |||| ||| ||| Sbjct 752954 TTGCACGCGTACATGTCGTACGACTCGCGGTAGTTCTTGACGATCCAGAAGGCGTACAAC 752895 Query 177868 TTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGTCTCCTCAGTTTGTGGAGTTTCT 177927 |||| ||| || ||| || || ||||||||||| ||| ||| | || || || || Sbjct 752894 TTGGCGACTCCGTAGGGCGAACGAGGGTAGAAGGGGGTCGTCTCGGACTGAGGGGTCTCG 752835 Query 177928 CGGACTTTACCAAACATCTCCGAAGTTGAGGCTTGGTA 177965 || || || ||| |||||| || ||||| ||||| Sbjct 752834 ACAACCTTGCCGTACAACTCCGAGGTCGAGGCCTGGTA 752797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569324086560