Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq16 132 4e-26 seq28 125 6e-24 seq15 118 1e-21 >seq16 Length=1730088 Score = 132 bits (146), Expect = 4e-26 Identities = 167/227 (74%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 24705 TGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCG 24764 |||| |||||| | || || || || || || || || || ||||| || || | ||| Sbjct 1516706 TGCAAATCTTTGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCG 1516765 Query 24765 ACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||| | || |||| || || || |||||||||||| ||||| || || || || || Sbjct 1516766 ACACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAG 1516824 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||||||||| || ||||| |||||| | | | || | || || ||| Sbjct 1516825 CAACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAAC 1516884 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||| ||||| || ||||||||| | || |||| || || Sbjct 1516885 ATCCAAAAGGAGTCGACCCTCCACTTGGTGCTCCGCCTGCGTGGTGG 1516931 >seq28 Length=4051571 Score = 125 bits (138), Expect = 6e-24 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| |||||| | || || || || || || || || || ||||| || || | |||| Sbjct 141353 GCAAATCTTTGTCAAGACTCTTACGGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGA 141412 Query 24766 CACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAAC 24824 ||| | || |||| || || || |||||||||||| ||||| || || || || || | Sbjct 141413 CACGATCGACAACGTCAAGACCAA-GATCCAAGACAAGGAAGGCATCCCGCCAGACCAGC 141471 Query 24825 AACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACA 24884 ||||| | ||||||||||| || ||||| |||||| | | | || | || || |||| Sbjct 141472 AACGTCTCATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCTTGGCCGACTACAACA 141531 Query 24885 TTCAAAAGGAATCGACACTACACTTGGT 24912 | |||||||| ||||| || |||||||| Sbjct 141532 TCCAAAAGGAGTCGACCCTCCACTTGGT 141559 Score = 95.1 bits (104), Expect = 1e-14 Identities = 791/1255 (63%), Gaps = 84/1255 (7%) Strand=Plus/Plus Query 138789 CGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC 138848 || ||||| ||| | | ||| || || ||| || |||| |||||| || ||||| Sbjct 4026522 CGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTGAGCTTACGCGCCTC 4026581 Query 138849 GGCGCTCTCGTACGGCAT-GCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCA 138907 || ||| ||||||| || || | ||||||||||||| || |||||||| || | Sbjct 4026582 GGGCGAATCGAACGGCATCGCCAAGGC-CATGAACGCGTCGGCGAGACCTTGCACTCCGA 4026640 Query 138908 CTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGATA---GGATAATAGT 138964 |||| ||||| ||||| | || || ||||||| || |||| ||||| |||| Sbjct 4026641 TGCCGATGGGGCGGTGGCGGAAGTTGGAG--TTTTGCGCCT-CGATGACGGGATAGTAGT 4026697 Query 138965 TTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGT- 139023 | || |||||||| ||| || || |||| ||||| | || | | | | | Sbjct 4026698 TGACGTCGATGATGCGGTTCAAGTTGAAAGCGACGACCTT-GACGACCTCGTGCAACTTC 4026756 Query 139024 TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACG-TCGACAAATTTGTTGACACAAAT 139082 | ||| ||||| ||| ||| | || || | ||| ||| | | | | Sbjct 4026757 TTAAAGTCGTACACGCC------GTCCTTGATGAAGCTCGGCAA---------CGCGA-T 4026800 Query 139083 CGAGGCTATGTTGCACACCGC-CACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCAC 139141 |||||| | |||||| || || |||| |||| || | ||| |||| || |||| | Sbjct 4026801 CGAGGCCAAGTTGCAGACGGCGCACT-CGTCCGGCGCCGAGTACTCGATGATCTCGGTGC 4026859 Query 139142 ACAAATTACTAC-ACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCA 139200 ||| || | || |||||||||| || | ||| | ||| || ||| ||| || Sbjct 4026860 ACAGGTT-CGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGCG 4026918 Query 139201 TCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAAC 139260 |||||||| |||||| | || |||||||||| || || | || | ||| | | | Sbjct 4026919 TCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGT--ACC 4026976 Query 139261 AAGTCCCTAGCTTGTATTTGACGCACGTAAAGTT--CGTCGCGC-----------TCGTA 139307 || ||||| ||| ||| | | ||| | | |||| ||||| Sbjct 4026977 AA------AGCTT----TTG-CGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTA 4027025 Query 139308 CTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTC 139367 || ||| | | || ||| || || ||| | || || || | | | | Sbjct 4027026 TTTCTCGAACAAGGCGCGGAACTCCTCGCCATAGACTTCGTGTAGGCCGGGGGCTTCGGC 4027085 Query 139368 AGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAAT 139427 || || | ||| | ||| ||||| |||| ||| ||| |||||| ||||| ||||| Sbjct 4027086 GGGGCAGAAGAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAAT 4027145 Query 139428 CCACAAAGCGAACAGCAAATCGCG--CGCCTTCTTATCTTCCGAACCCATGTTACGTTTC 139485 ||| | || || | | ||| || ||| ||| | ||| || ||| || | Sbjct 4027146 CCAGAGCGCAAAGAAGAGATCACGAGCGCGAACTT--CCTCCTTGCCGTGGTTC--TTGC 4027201 Query 139486 --ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGC 139543 | || ||||| || || ||||| |||||||| || || || ||||| || | || | Sbjct 4027202 GAAGGTCCAGGAATTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTC 4027261 Query 139544 CTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACA 139600 | || ||| |||||||| ||||||| || | | || ||| | || || | || Sbjct 4027262 CGGGACGCTTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCA 4027321 Query 139601 TCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGA--CTGTTGCGAGCT 139656 | || | | ||| ||| ||||| |||| |||| ||| | || ||| Sbjct 4027322 TGGGGACAATGCCGTTCGAGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCG---- 4027377 Query 139657 CGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCG 139716 |||| || || | | | ||||| || ||| | ||||| || | |||| || Sbjct 4027378 CGGATGTTGTGGATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCA--CG 4027435 Query 139717 -CGTAAT-GTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATG 139774 | ||| || ||||| || ||| || || |||| |||||||||||| || || | Sbjct 4027436 TCTTAAGCGTGTCGTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGG 4027495 Query 139775 ACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACA 139834 ||||||| ||||| | ||| ||||| || || || || ||||| || || Sbjct 4027496 ACGAAAGCTGCGGGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGT 4027555 Query 139835 TTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATAC 139894 | | ||||| | | ||||| | | | ||| | |||| || |||||||| | Sbjct 4027556 AGCGCTCGGACATAAGGTTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGC 4027615 Query 139895 CGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttt 139954 |||| | ||| ||||| ||||| ||||| |||||||| ||| ||| ||||| Sbjct 4027616 CGACGGCGACACGCATGAGCATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAA 4027675 Query 139955 tCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATCG 140007 || || | ||| || || || ||| |||||||||| | ||| ||||||| Sbjct 4027676 GCAAGTAGGAGCGT--TCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCG 4027728 >seq15 Length=1365434 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || ||||| || || || || || |||||||| || || | | Sbjct 784673 GATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTC 784732 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| || || ||||| || ||||| ||||| || || || || | Sbjct 784733 GGACACGATCGACAACGTCAAGAC-CAAGATTCAGGACAAGGAAGGCATTCCCCCAGACC 784791 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || || |||||||| || || || ||||| |||||| | | | | ||||| | Sbjct 784792 AGCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACA 784851 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||| || ||||| ||||| || ||||||||| |||| Sbjct 784852 ACATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCG 784888 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| || || || || || |||||||| || || || | Sbjct 784902 ATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 784961 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || ||||| || ||||| ||||| || || || || || Sbjct 784962 GACACGATCGACAACGTCAAGAC-CAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCA 785020 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || |||||||| || || || ||||| |||||| | | | | ||||| || Sbjct 785021 GCAGCGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 785080 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| ||||| || ||||||||| |||| Sbjct 785081 TATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCG 785116 Score = 116 bits (128), Expect = 3e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| || || || || || |||||||| || || | | Sbjct 785130 ATGCAGATCTTTGTCAAGACGCTTACGGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 785189 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || || ||||| || ||||| ||||| || || || || || Sbjct 785190 GACACGATCGACAACGTCAAGAC-CAAGATTCAGGACAAGGAAGGCATTCCCCCAGACCA 785248 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || |||||||| || || || ||||| |||||| | | | | ||||| || Sbjct 785249 GCAGCGATTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 785308 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| ||||| || ||||||||| |||| Sbjct 785309 CATCCAGAAGGAGTCGACGCTCCACTTGGTGCTGCG 785344 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || || |||||||| || || | | Sbjct 535678 ATGCAAATCTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCGTCG 535737 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 535738 GACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCAG 535797 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 535798 CAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 535857 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| ||||| || ||||||||| Sbjct 535858 ATCCAGAAGGAGTCGACGCTGCACTTGGTG 535887 Score = 105 bits (116), Expect = 6e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | || || || ||||| || || || |||||||| || || | | Sbjct 535449 GATGCAAATTTTCGTCAAGACCCTGACCGGCAAGACGATCACGCTCGAGGTCGAGTCGTC 535508 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||||||||| || || || ||||| || || Sbjct 535509 GGACACGATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAGGGCATTCCTCCAGACCA 535568 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 535569 GCAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAA 535628 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || ||||| ||||| || ||||||||| Sbjct 535629 TATCCAGAAGGAGTCGACGCTGCACTTGGTG 535659 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || ||||||||||| || || | | Sbjct 535906 ATGCAAATCTTCGTCAAGACCCTGACTGGCAAGACGATTACGCTCGAGGTCGAGTCGTCG 535965 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || || || ||||| || || Sbjct 535966 GATACGATCGACAACGTCAAGGCTAAGATTCAGGACAAGGAGGGCATTCCTCCAGACCAG 536025 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||||| |||||| | | | | ||||| || Sbjct 536026 CAGCGATTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACGCTCGCCGATTACAAT 536085 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| ||||| ||||| || ||||||||| Sbjct 536086 ATTCAGAAGGAGTCGACGCTGCACTTGGTG 536115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897391922360