Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq16 129 4e-25 seq28 122 6e-23 seq15 109 4e-19 >seq16 Length=1730088 Score = 129 bits (142), Expect = 4e-25 Identities = 155/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||| | ||| |||||| || ||||| ||||| | | | |||| |||| Sbjct 1516916 AGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 1516857 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || |||||||||||| |||| | || |||||||| Sbjct 1516856 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 1516797 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| |||||| Sbjct 1516796 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 1516737 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 || |||||||||||||| |||||||| |||| Sbjct 1516736 TTGCCCGTGAGGGTCTTGACAAAGATTTGCA 1516706 >seq28 Length=4051571 Score = 122 bits (134), Expect = 6e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| |||||| || ||||| ||||| | | | |||| |||| Sbjct 141562 AGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCATCC 141503 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || |||||||||||| |||| | || |||||||| Sbjct 141502 TCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCT 141443 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| || ||| Sbjct 141442 TGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 141383 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980 || ||||| || ||||| |||||||| ||| |||| Sbjct 141382 TTGCCCGTAAGAGTCTTGACAAAGATTTGCCTGAT 141348 >seq15 Length=1365434 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | || ||||||||| ||||| || || | || |||| |||| Sbjct 784886 CAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATC 784827 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || |||||||||| ||| ||||||||| | || | || |||||||| Sbjct 784826 CTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 784767 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | |||| || | |||||| || | || || || Sbjct 784766 CTGAATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGT 784707 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| || ||||| |||||||||||||| Sbjct 784706 CTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 784674 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | || ||||||||| || || || || | || |||| |||| Sbjct 785114 CAGCACCAAGTGGAGCGTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATC 785055 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || |||||||||| ||| ||||||||| | || | || |||||||| Sbjct 785054 CTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 784995 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | |||| || || |||||| || | || || || Sbjct 784994 CTGAATCTTGGTCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGT 784935 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| || ||||| |||||||||||||| Sbjct 784934 CTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 784902 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | || ||||||||| ||||| || || | || |||| |||| Sbjct 785342 CAGCACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCATC 785283 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || |||||||||| ||| ||||||||| | || | || |||||||| Sbjct 785282 CTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTC 785223 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | |||| || | |||||| || | || || || Sbjct 785222 CTGAATCTTGGTCTTGACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGT 785163 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| ||||| || ||||| |||||||||||||| Sbjct 785162 CTTGCCCGTAAGCGTCTTGACAAAGATCTGCAT 785130 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||| || || || | || |||| |||| || || ||||| || || || Sbjct 536097 CTCCTTCTGAATATTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 536038 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||| ||||||||| | || | ||||||||||| | || || |||||| Sbjct 536037 GATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCCTTGACGTT 535978 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | |||||| || | || || ||||| || || |||||||| || Sbjct 535977 GTCGATCGTATCCGACGACTCGACCTCGAGCGTAATCGTCTTGCCAGTCAGGGTCTTGAC 535918 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 535917 GAAGATTTGCAT 535906 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || || || | || |||| |||| || || ||||| || || || Sbjct 535869 CTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 535810 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||| ||||||||| | || | ||||||||||| | || || |||||| Sbjct 535809 GATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 535750 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | |||||| || | || || ||||| || || |||||||| || Sbjct 535749 GTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 535690 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 535689 GAAGATTTGCAT 535678 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| || || || || | || |||| |||| || || ||||| || || || Sbjct 535641 CTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAA 535582 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||| ||||||||| | || | ||||||||||| | || || |||||| Sbjct 535581 GATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTT 535522 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | |||||| || | || || ||||| || || |||||||| || Sbjct 535521 GTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGAC 535462 Query 34966 AAAGATCTGCAT 34977 || || ||||| Sbjct 535461 GAAAATTTGCAT 535450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692653132903