Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq28 279 5e-70 seq15 138 1e-27 seq16 131 2e-25 seq19 86.0 6e-12 >seq28 Length=4051571 Score = 279 bits (308), Expect = 5e-70 Identities = 835/1262 (66%), Gaps = 44/1262 (3%) Strand=Plus/Plus Query 148532 CGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTT 148591 ||||| ||||| || ||||| |||| ||| ||| || |||||| |||||| |||| Sbjct 4026507 CGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 4026566 Query 148592 GAGCA---GCGCCGCCGACTCGCTTTCGTACGGCATACGC--AGCCGCACAAACGCGTCG 148646 |||| ||||| | | | ||| ||||||| ||| || | || ||||||||| Sbjct 4026567 GAGCTTACGCGCCTCGGGCGAA---TCGAACGGCAT-CGCCAAGGC-CATGAACGCGTCG 4026621 Query 148647 GCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC 148706 || || || || || || | ||| ||||| ||||| | ||||||| |||| ||| Sbjct 4026622 GCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGC-CTC 4026680 Query 148707 TC-GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTG 148764 || ||||||| |||| ||||||||| || |||| ||| | || ||||| Sbjct 4026681 GATGACGGGATAGTAGTTGACGTCGATGATGCGGTTCAAG-TTGAAAGCGACGACCTTGA 4026739 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGGC 148822 | | ||| | | ||| |||||| | | || |||| | |||| || || Sbjct 4026740 CGACCTCGTGCAACTTCTTAAAGTCGTACACGCCGTCCTTGATGAAGCTCGG--CAACGC 4026797 Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882 ||| ||||| | ||||| ||||| ||| ||||| || |||||| | |||||||| Sbjct 4026798 GATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGT 4026857 Query 148883 GCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGC 148942 |||||| || | |||||| ||| | |||||||| || || |||| || Sbjct 4026858 GCACAGGTTCGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGC 4026917 Query 148943 GTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCG 148999 ||| ||||| ||||| | || ||||||||| ||||| | ||| | || | ||| Sbjct 4026918 GTCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCA 4026977 Query 149000 ATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATA 149059 | || | |||||| | | | || | ||| ||||||| |||||| | Sbjct 4026978 AAGC---TTTTGCGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 4027034 Query 149060 CA-GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG-CAC 149117 || | ||| |||| ||||||| ||| |||| || |||||| ||| ||||| || Sbjct 4027035 CAAGGCGCG-GAACTCCTCGCCATAGACTTCGTGTAGGCCGGGGG-CTTCGGCGGGGCAG 4027092 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 | ||| | ||| ||||| | || | || |||| ||| || |||||||| | ||||||| Sbjct 4027093 AAGAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGC 4027152 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGC---GCCCATGTTGCGGCGCAGGTTG 149234 || | | ||| || || || || |||| | ||| ||| ||| |||| Sbjct 4027153 GCAAAGAAGAGATCACGAGC---GCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCC 4027209 Query 149235 AGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC 149294 || | ||| | ||| |||||||||||||| | ||| | ||||| || || ||| Sbjct 4027210 AGGAATTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGC 4027269 Query 149295 ---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCA 149351 ||||| || |||||||||| |||| | ||||||| | || || | ||| || || Sbjct 4027270 TTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACA 4027329 Query 149352 ATGCCACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTG 149410 ||||| | | ||| |||||| || | ||| |||| ||| || | ||||| Sbjct 4027330 ATGCCGTTCG-AGTAGCCGTTCGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTG 4027388 Query 149411 CACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCG 149469 | | | | ||||| || ||| || ||| |||||| |||||| ||| ||||| Sbjct 4027389 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTC-TTAAGCGTGT 4027447 Query 149470 AGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCG 149529 ||| ||||| || || || |||||| || | ||| || || || | | |||| Sbjct 4027448 CGTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCG 4027507 Query 149530 GAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCA 149589 | | |||| ||||| ||| | || || |||||| ||||| || || | || Sbjct 4027508 GGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACA 4027567 Query 149590 TCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGC 149649 | | | |||||||| | ||||| || ||||| | || |||||||| | |||||| | Sbjct 4027568 TAAGGTTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACAC 4027627 Query 149650 GCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGT 149709 |||| ||||| || ||||| || || || || ||| | || ||||||||| | Sbjct 4027628 GCATGAGCATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGC 4027687 Query 149710 TTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGG 149769 ||| || || ||| |||||||||| |||||| | || |||||| ||| | ||| ||| Sbjct 4027688 GTTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAG---ATGACGG 4027744 Query 149770 CG 149771 || Sbjct 4027745 CG 4027746 Score = 129 bits (142), Expect = 6e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 141556 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 141498 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 141497 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 141438 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 141437 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 141378 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || || || || ||| || Sbjct 141377 CGTAAGAGTCTTGACAAAGATTTGCCTG 141350 >seq15 Length=1365434 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 535646 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 535588 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 535587 AGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTT 535528 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||||||||| || Sbjct 535527 GACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 535468 Query 133643 TTTTACGAAAATCTGCAT 133660 || |||||||| ||||| Sbjct 535467 CTTGACGAAAATTTGCAT 535450 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 535874 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 535816 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 535815 AGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTT 535756 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||||||||| || Sbjct 535755 GACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 535696 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 535695 CTTGACGAAGATTTGCAT 535678 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 785098 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 785040 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || || |||||||||||||| ||||| ||| Sbjct 785039 AGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGTCTT 784980 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||| || || || Sbjct 784979 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 784920 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 784919 CTTGACAAAGATCTGCAT 784902 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | |||| | | | ||||||||||||||||| Sbjct 784870 GTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 784812 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || | ||||||||||| || || |||||||||||||| ||||| ||| Sbjct 784811 CGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGTCTT 784752 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 784751 GACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 784692 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 784691 CTTGACAAAGATCTGCAT 784674 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | |||| | | | ||||||||||||||||| Sbjct 785326 GTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 785268 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || | ||||||||||| || || |||||||||||||| ||||| ||| Sbjct 785267 CGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGTCTT 785208 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 785207 GACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 785148 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 785147 CTTGACAAAGATCTGCAT 785130 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 536102 GTCGACTCCTTCTGAATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 536044 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 536043 AGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCCTT 535984 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||| || | | ||| || |||| || | || ||||| ||||| || Sbjct 535983 GACGTTGTCGATCGTATCCGACGACTCGACCTCGAGCGTAATCGTCTTGCCAGTCAGGGT 535924 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 535923 CTTGACGAAGATTTGCAT 535906 >seq16 Length=1730088 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 1516910 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 1516852 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 1516851 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 1516792 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| ||| ||||| Sbjct 1516791 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCC 1516732 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCA 133659 || || || || || || || |||| Sbjct 1516731 CGTGAGGGTCTTGACAAAGATTTGCA 1516706 >seq19 Length=1040457 Score = 86.0 bits (94), Expect = 6e-12 Identities = 175/251 (70%), Gaps = 13/251 (5%) Strand=Plus/Plus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC-GCCGACGTGAAA 120552 ||| ||||||| || || |||||||| | ||| || | || || ||| || || Sbjct 929081 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAA-CCGCAGGGAAGAGCCTCGGTCAAG 929139 Query 120553 AACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCAT 120611 || |||||||| || || || |||||||| | ||| ||| | | ||| | ||| | Sbjct 929140 AATTCCTTCTCGATCTCGACGGCCTCCTTAATGATGAGCGCG---ACGGTGTCGGGG--T 929194 Query 120612 CTTGTGTTCGATGCGCGTTCGGTAGTACA---GGCACGCAAAGTCCGTGTGCAGGCCCTC 120668 | |||| | || | | || || ||| |||| |||||||| ||||| |||||||| Sbjct 929195 GAGGCCTTCGCT-CGAGGTGGG-AGAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTC 929252 Query 120669 GTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGAT 120728 ||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 929253 GTCACGCGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAG 929312 Query 120729 GTAGAATATGG 120739 |||| |||| Sbjct 929313 CCAGAAGATGG 929323 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 121039 TTCACGATACTGTCGGCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCG 121098 || ||||| | ||||| ||||||||| || || || |||||| ||| |||| |||||| Sbjct 929900 TTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGATGAAGTAGCGCTCG 929959 Query 121099 TCGTCCGTGAGCTTGTGCGCAAAATCGT-CATAGTCCTTGGACAGGTCGACCTCCTC 121154 ||| | ||||||||| | | |||| ||| ||||||||||||||| | ||| || Sbjct 929960 TCGGGCTTGAGCTTGTTGTCCCAGTCGTGCAT-GTCCTTGGACAGGTCCATCTCTTC 930015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483420576417880