Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq28 136 4e-27 seq16 134 1e-26 seq15 134 1e-26 >seq28 Length=4051571 Score = 136 bits (150), Expect = 4e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | || | ||| || || || |||||||| |||||||||||| | Sbjct 141577 CCACCTCGGAGGCGGAGGACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCC 141518 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| ||||| || | ||| ||||| || ||||| Sbjct 141517 AAGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGG 141458 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| || || ||||| ||| | ||||||||||| || || Sbjct 141457 ATGCCTTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACC 141398 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGC 134711 ||||| || || || || || || | ||| || || || |||||| Sbjct 141397 TCGAGGGTGATCGTCTTGCCCGTAAGAGTCTTGACAAAGATTTGC 141353 Score = 89.7 bits (98), Expect = 5e-13 Identities = 330/516 (64%), Gaps = 11/516 (2%) Strand=Plus/Minus Query 7472 ACGAGCGCGATTACGATTACCGTTATTTTGCCGTAAAAACTTTAAAAAACGGCTACTTGT 7531 |||| ||||||| || ||| || |||| | | ||||| | || | ||||||| Sbjct 4027735 ACGACCGCGATTTCGGCTACAACTACTTTGGCTTCAAAACGCTCGAACGCTCCTACTTGC 4027676 Query 7532 TGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGG 7591 | ||| ||||| | ||| ||||| ||||||||||| |||| || || || | Sbjct 4027675 TTCGCATCGACGGCAAGGTCGCCGAACGCCCGCAACACATGCTCATGCGTGTCGCCGTCG 4027616 Query 7592 GCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAAC 7651 |||| ||||| | |||||||| || |||| | ||||| | | ||||| | Sbjct 4027615 GCATCCACGGTCACGACATTGAGCGCGTCTTGCAGTCGTACAACCTTATGTCCGAGCGCT 4027556 Query 7652 AGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC----GCCTCAATTG 7707 | ||||| ||||| ||||| || | || ||| || ||||| || || | Sbjct 4027555 ACTTTACCCACGCCTCGCCGACGCTCTTCAACGCCGG----AACGCCTCACCCGCAGCTT 4027500 Query 7708 TCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTG 7767 || || ||||| || | || ||| || || || || ||||||||| ||||||| Sbjct 4027499 TCGTCCTGTTTCCTGGTCACGATGAAGGATGATTCGATTGAAGGCATTTACGACACGCTT 4027440 Query 7768 CGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTG 7827 ||||| || ||||| || ||| || || ||| ||| | | || || | Sbjct 4027439 AAGACGTGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATC 4027380 Query 7828 CGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATG 7887 ||||| | ||| | ||||| ||| ||||| | | | ||| | | |||||| Sbjct 4027379 CGCGCGACCGGCTCCTACATCGCCGGCACGAACGGCTACTCGAACGGCATTGTCCCCATG 4027320 Query 7888 TTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGC 7944 | || || | ||| ||| | | ||| | || ||||| || || ||||| || Sbjct 4027319 CTCCGTGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGA 4027260 Query 7945 GCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 ||| || ||||| | |||||||||||||| ||| Sbjct 4027259 GCCTTCGCGATCTACCTCGAGCCGTGGCACGCCGAC 4027224 >seq16 Length=1730088 Score = 134 bits (148), Expect = 1e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || || || |||||||| |||||||||||| | | |||| | Sbjct 1516922 AGGCGGAGCACCAAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGG 1516863 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || |||||||| ||||| ||||| || | ||| ||||| || ||||| |||||||| Sbjct 1516862 CCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCC 1516803 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || || ||||| ||| | ||||||||||| || || ||||| || Sbjct 1516802 TTGTCTTGGATCTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTG 1516743 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712 ||||| || || || | || || || || ||||||| Sbjct 1516742 ATGGTCTTGCCCGTGAGGGTCTTGACAAAGATTTGCA 1516706 >seq15 Length=1365434 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | ||| | ||| ||||| || ||||| || || ||||| ||| | Sbjct 535676 CCACCTCGGAGACGGAGCACCAAGTGCAGCGTCGACTCCTTCTGGATATTGTAATCGGCG 535617 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| ||||| ||||| |||||||| || || || Sbjct 535616 AGCGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAATCGCTGCTGGTCTGGAGGA 535557 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || ||||| ||| | ||||| ||||| || || Sbjct 535556 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGACGACTCGACC 535497 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || ||||| | || || |||||||||||||| Sbjct 535496 TCGAGCGTGATCGTCTTGCCGGTCAGGGTCTTGACGAAAATTTGCAT 535450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398166253240