Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900015445.1_202016-12-23] 37 sequences; 30,318,316 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq19 140 3e-28 >seq19 Length=1040457 Score = 140 bits (154), Expect = 3e-28 Identities = 195/271 (72%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 30187 CAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACTCTGCTCCGA 30245 || |||||| ||||| ||||| || || || | |||| | |||||||| |||| Sbjct 811068 CAACTGATCGACCCCTTTCCCCTGATAATCATCCTTGGCCGTCC-TATACTCTGCGCCGA 811010 Query 30246 AATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGC 30305 ||||||||||||||||||| || |||||||||| || ||||||||||| || | || | Sbjct 811009 AATGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATGACCCAACC 810950 Query 30306 CCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCAG 30365 | ||| |||| ||| | ||| || || || | ||||| || || |||||||| || | Sbjct 810949 CAACCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCCTTGTCGG 810890 Query 30366 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 30425 | | ||| || | || || |||| |||||||| ||||| ||||| | || | Sbjct 810889 ACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCAATGATACCTC 810830 Query 30426 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 | ||||||| ||||||| || | ||||| Sbjct 810829 GCGTAAAGACCTTCTTGGTGGTCAAAAGGGG 810799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310216779404