Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016685.1_202016-07-08] 4,558 sequences; 26,906,941 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2114 109 1e-18 >seq2114 Length=46174 Score = 109 bits (120), Expect = 1e-18 Identities = 668/1047 (64%), Gaps = 51/1047 (5%) Strand=Plus/Minus Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798 ||||||||||| || | || || |||||||||||| ||||| | || ||||| Sbjct 34605 TTCGTGAAGATGTAACGAGCCGAAGCCGCGTCTTTACCACCTTGCAGACGCGTACCAAAT 34546 Query 281799 TGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGT 281856 ||||| | ||| | | || ||| | ||| ||| ||||||| | | || |||||| Sbjct 34545 TGACCGTTCGGGTCGAGAA--TGTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAGGC 34488 Query 281857 TGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACAT 281916 || ||| || || || | | |||||||| || || || ||| ||||| || | Sbjct 34487 CGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGTACGCCGAGTGCTCGGCGACGT 34428 Query 281917 AACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---T 281973 |||| | || ||| | ||||| | || ||||| ||||| ||||| |||| Sbjct 34427 AACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACTTGCGCTTGAA---GCAACCGA 34371 Query 281974 ATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCA 282033 | || || || |||||| ||||| || ||||||| |||||| ||||| ||| | Sbjct 34370 ACAAGACCTTGCGTTGACCCGGCTTAAACCCATCAATGACAGAGGGAATAGAGCGCACGT 34311 Query 282034 GGTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGT-CGGGAACGGGAACCTCG 282092 ||| | |||||| | || | ||||||| ||||| | | || |||| || ||| Sbjct 34310 TGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATGAAATCCTCGATCGGG-ACTTCG 34252 Query 282093 GGCTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTATGCCGTC--ATCCACTCCTTGCGAT 282150 | | ||||||| || | | || || || | ||| || | ||| |||||||| | Sbjct 34251 GCGATGCTGTGGTCGAGGTACGTGCCGGGGACG-AAGCC-TCGGAGCCATTCCTTGCGGT 34194 Query 282151 CCTCGGCCCGAGTCTTGTTGAAAGAACGATCGATGAGCTC-------TCCAGAATCAGAA 282203 |||||| |||||||||| | ||||| ||||| ||| | || ||| Sbjct 34193 TGTCGGCCTTCTTCTTGTTGAAGGCCATGTCGATCAGCTCGCGCTCTTCCTGCGTC-GAA 34135 Query 282204 GTCCACGTAAACGTCTTCATAAGAGTCTTCAGGTTGCTGAAGTAATGCTTG---GCATCA 282260 | | |||| | | | | | || ||||| ||||| |||| || || Sbjct 34134 GGGC---GGAACGGCAAGCGATGCTTGTCCATGTTGCCAAAGTA---CTTGACCGCGTCC 34081 Query 282261 GTGCTGGAACTCGTACCGAGACCCTTGTAATACTTGATTTGATACTTAGAATAATCCTTC 282320 || | ||||||||| | |||||| | |||||||| | | | | | | || Sbjct 34080 CTGGCGTCACTCGTACCCAATCCCTTGAAGTACTTGATGCGCCATCCACGACCGT-CATC 34022 Query 282321 GTGGTCTT-CACCCAATCCTCGTAATCCGGAAGACTATAAAATTCGCGAACGTCCT--TT 282377 | |||| | ||| | |||||| | |||| | ||||| | ||| |||| || Sbjct 34021 GGTCTCTTCCTTCCAGTGCTCGTACTGAGGAATTGTGAAAAAT--GACAAC-TCCTTGTT 33965 Query 282378 CCTTTCTTGG-CGAC--CACGATAGGTGTGATGAACTTCTTCAAGAAACCTGGAATTTCT 282434 || ||||| || | ||||| || ||||| |||| |||||| || | | Sbjct 33964 CC--CCTTGGTCGCCTTGACGATGGGGGTGATAAACTCGAGCAAGAAGCCCTTTAGCTTG 33907 Query 282435 AGGAGACTGGGAAAACAGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCG 282494 || | || || ||| || || ||||| |||| ||||| |||||| | ||| Sbjct 33906 AGCAACGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTAATGTGCGATCCA 33847 Query 282495 TCAACATCCGCGTCGGTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTG 282554 || ||| |||| ||||||||| | | ||||| | || || ||| || Sbjct 33846 TCGTGATCTTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTG 33787 Query 282555 TACACTTTACCGGTTTGAAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTTCTTT 282614 || ||||| || || || ||||| || || |||| ||| || || | || | Sbjct 33786 TAAACTTTGCCCTGCTGCAGACCCAAGATCTGCTTGATCGCTTGAATCTCGGCATTGTCG 33727 Query 282615 GTGA-TACTTGCCACAGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAAC 282673 || ||| | | | || || || ||||| |||||||| || || | ||| ||||| Sbjct 33726 AGGAGGGCTTTGC-CCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAAAC 33668 Query 282674 ACCATATCTCTCGCGACCGACCACGGACAGTCCTGCAATTGCAAGTG--TTGCTGCGGAA 282731 |||||| | || |||||||| || | ||| || | | || || | ||| |||||| Sbjct 33667 ACCATAGTTGTCTCGACCGACGACAGCCAGACCCGAGACGGCGAGCGCCTTG--GCGGAA 33610 Query 282732 TCTCCCTCCGTCAAGATGAGAGTACAC 282758 ||||| || ||||||||||| || ||| Sbjct 33609 TCTCCTTCGGTCAAGATGAGCGTGCAC 33583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057762223739540