Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016685.1_202016-07-08] 4,558 sequences; 26,906,941 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2299 96.9 4e-15 >seq2299 Length=200938 Score = 96.9 bits (106), Expect = 4e-15 Identities = 185/270 (69%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 145998 CTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGA-GTCCACGTACGCGGCCCCGAAGT 146056 ||| || || || | |||| | ||||| ||||| |||| ||| | || ||||| | Sbjct 21399 CTGATCGACCCCTTTCCCCTGATAATCATCCTTGGCCGTCCTA-TACTCTGCGCCGAAAT 21341 Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGG 146116 |||||||||||||||| || || || ||||| ||||| ||||| || |||| ||| Sbjct 21340 GCCTCCACTGGAACCCATAAACCGGTCCCAGATCCCCCTCTTCCCTATGACCCAACCCAA 21281 Query 146117 CCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGA 146176 || | || || | | || || || | ||||| || ||||| ||| | |||| | Sbjct 21280 CCTTATCCAGAAACTGTCTCGATCCATTCCCATCCCAAATTTTGACCCCCTTGTCGGACA 21221 Query 146177 GCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCC 146236 || || || || || || | | |||||| ||||| || || | || || | | Sbjct 21220 ATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGCAGTTCCTCAATGATACCTCGCG 21161 Query 146237 AGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 |||||| |||||||||||| ||||||| Sbjct 21160 TAAAGACCTTCTTGGTGGTCAAAAGGGGGA 21131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590043180374320