Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016685.1_202016-07-08] 4,558 sequences; 26,906,941 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2507 282 4e-71 seq1999 138 1e-27 seq1907 131 2e-25 seq1886 129 6e-25 seq1341 129 6e-25 seq1301 129 6e-25 seq2299 86.0 6e-12 >seq2507 Length=9308 Score = 282 bits (312), Expect = 4e-71 Identities = 836/1262 (66%), Gaps = 44/1262 (3%) Strand=Plus/Plus Query 148532 CGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTT 148591 ||||| ||||| || ||||| |||| ||| ||| || |||||| |||||| |||| Sbjct 6023 CGCCATGTCGCACGACGACTCGATCGCGGCGTGGTAGATGGTCTCGAAGATTTGCTTGTT 6082 Query 148592 GAGCA---GCGCCGCCGACTCGCTTTCGTACGGCATACGC--AGCCGCACAAACGCGTCG 148646 |||| ||||| | | | ||| ||||||| ||| || | || ||||||||| Sbjct 6083 GAGCTTACGCGCCTCGGGCGAA---TCGAACGGCAT-CGCCAAGGC-CATGAACGCGTCG 6137 Query 148647 GCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTC 148706 || || || || || || | ||| ||||| ||||| | ||||||| |||| ||| Sbjct 6138 GCGAGACCTTGCACTCCGATGCCGATGGGGCGGTGGCGGAAGTTGGAGTTTTGCGC-CTC 6196 Query 148707 TC-GAGCGGATAGTGGTTGCGGTCGATGATCTTGT-CAAGATTGCGCACCACCACCTTTG 148764 || ||||||| |||| ||||||||| || |||| ||| | || ||||| Sbjct 6197 GATGACGGGATAGTAGTTGACGTCGATGATGCGGTTCAAG-TTGAAAGCGACGACCTTGA 6255 Query 148765 TAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCA--TCGGTTCACGGC 148822 | | ||| | | ||| |||||| | | || |||| | |||| || || Sbjct 6256 CGACCTCGTGCAACTTCTTAAAGTCGTACACGCCGTCCTTGATGAAGCTCGG--CAACGC 6313 Query 148823 GATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGC 148882 ||| ||||| | ||||| ||||| ||| ||||| || |||||| | |||||||| Sbjct 6314 GATCGAGGCCAAGTTGCAGACGGCGCACTCGTCCGGCGCCGAGTACTCGATGATCTCGGT 6373 Query 148883 GCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGC 148942 |||||| || | |||||| ||| | |||||||| || || |||| || Sbjct 6374 GCACAGGTTCGACGACTTGATCGTGCCAAGATTCTTTTGGTTCGATTTCTTGTTCGCGGC 6433 Query 148943 GTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACCG 148999 ||| ||||| ||||| | || ||||||||| ||||| | ||| | || | ||| Sbjct 6434 GTCTTTGTAGAGCATAAAAGGGTTGCCAGTTTCGACCTGGGCTTCAAGAATCGCGTACCA 6493 Query 149000 ATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATA 149059 | || | |||||| | | | || | ||| ||||||| |||||| | Sbjct 6494 AAGC---TTTTGCGCGGGGATCGTTTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 6550 Query 149060 CA-GCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGG-CAC 149117 || | ||| |||| ||||||| ||| |||| ||| |||||| ||| ||||| || Sbjct 6551 CAAGGCGCG-GAACTCCTCGCCATAGACTTCGTGGAGGCCGGGGG-CTTCGGCGGGGCAG 6608 Query 149118 ATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGC 149177 | ||| | ||| ||||| | || | || |||| ||| || |||||||| | ||||||| Sbjct 6609 AAGAGAGGCCAATCGCCGGCGGCCTCGACACGCTCCATGAAAAGATCGGGAATCCAGAGC 6668 Query 149178 GCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGC---GCCCATGTTGCGGCGCAGGTTG 149234 || | | ||| || || || || |||| | ||| ||| ||| |||| Sbjct 6669 GCAAAGAAGAGATCACGAGC---GCGAACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCC 6725 Query 149235 AGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC 149294 || | ||| | ||| |||||||||||||| | ||| | ||||| || || ||| Sbjct 6726 AGGAATTCGAAGACGTCGGCGTGCCACGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGC 6785 Query 149295 ---TTGCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCA 149351 ||||| || |||||||||| |||| | ||||||| | || || | ||| || || Sbjct 6786 TTGTTGCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACA 6845 Query 149352 ATGCCACTGGCAGT-GCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTG 149410 ||||| | | ||| |||||| || | ||| |||| ||| || | ||||| Sbjct 6846 ATGCCGTTCG-AGTAGCCGTTTGTGCCGGCGATGTAGGAGCCGGTCGCGCGGATGTTGTG 6904 Query 149411 CACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GTCGCCGAGCGTCG 149469 | | | | ||||| || ||| || ||| |||||| |||||| ||| ||||| Sbjct 6905 GATGCTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTC-TTAAGCGTGT 6963 Query 149470 AGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCG 149529 ||| ||||| || || || |||||| || | ||| || || || | | |||| Sbjct 6964 CGTAAATGCCTTCAATCGAATCATCCTTCATCGTGACCAGGAAACAGGACGAAAGCTGCG 7023 Query 149530 GAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCA 149589 | | |||| ||||| ||| | || || |||||| ||||| || || | || Sbjct 7024 GGTGAGGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACA 7083 Query 149590 TCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGC 149649 | | | |||||||| | ||||| || ||||| | || |||||||| | |||||| | Sbjct 7084 TAAGGTTGTACGACTGCAAGACGCGCTCAATGTCGTGACCGTGGATGCCGACGGCGACAC 7143 Query 149650 GCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGT 149709 |||| ||||| || ||||| || || || || ||| | || ||||||||| | Sbjct 7144 GCATGAGCATGTGTTGCGGGCGTTCGGCGACCTTGCCGTCGATGCGAAGCAAGTAGGAGC 7203 Query 149710 TTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGG 149769 ||| || || ||| |||||||||| |||||| | || |||||| ||| | ||| ||| Sbjct 7204 GTTCGAGCGTTTTGAAGCCAAAGTAGTTGTAGCCGAAATCGCGGTCGTAG---ATGACGG 7260 Query 149770 CG 149771 || Sbjct 7261 CG 7262 >seq1999 Length=101763 Score = 138 bits (152), Expect = 1e-27 Identities = 151/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 133 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 191 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| ||||| ||||| |||||||| |||||| ||| Sbjct 192 AGCAAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCTTGGATCTTGGCCTT 251 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||||||||| || Sbjct 252 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 311 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 312 CTTGACGAAGATTTGCAT 329 >seq1907 Length=45099 Score = 131 bits (144), Expect = 2e-25 Identities = 154/206 (75%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 41256 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 41198 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 41197 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 41138 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| ||| ||||| Sbjct 41137 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCC 41078 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCA 133659 || || || || || || || |||| Sbjct 41077 CGTGAGGGTCTTGACAAAGATTTGCA 41052 >seq1886 Length=108772 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 70237 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 70295 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || || |||||||||||||| |||||| ||| Sbjct 70296 AGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGTCTT 70355 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 70356 GACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 70415 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 70416 CTTGACAAAGATCTGCAT 70433 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||||||| | | |||| | | | ||||||||||||||||| Sbjct 70009 GTCGACTCCTTCTGGATGTTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 70067 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| || || ||||| || || ||||| ||||| || |||||| ||| Sbjct 70068 AGCGAAGATGAGACGTTGTTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTT 70127 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || ||| || |||| |||| || ||||| ||||| || Sbjct 70128 GACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTGCCCGTCAGCGT 70187 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 70188 CTTGACAAAGATCTGCAT 70205 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | | ||| | | | ||||||||||||||||| Sbjct 69781 GTCGACTCCTTCTGGATGTTGTAATCCGCGAGCGTACGGCCA-TCCTCGAGCTGCTTGCC 69839 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 |||| | || | ||||||||||| || || |||||||||||||| ||||| ||| Sbjct 69840 CGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGAATCTTGGTCTT 69899 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | | ||| || |||| |||| || ||||| || || || Sbjct 69900 GACGTTGTCGATCGTGTCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCCGTAAGCGT 69959 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 69960 CTTGACAAAGATCTGCAT 69977 >seq1341 Length=107648 Score = 129 bits (142), Expect = 6e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| || || || ||||| ||| ||| ||| | | | |||||||| Sbjct 55458 AAGTGGAGGGTCGACTCCTTTTGGATGTTGTAGTCGGCCAAGGTGCGGCCA-TCCTCGAG 55400 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || | ||||| || |||||||| || ||||||||||||||||| ||| Sbjct 55399 CTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGAT 55340 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||||| | || | |||||||| | ||| || |||| ||||| || ||||| Sbjct 55339 CTTGGTCTTGACGTTGTCGATCGTGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCC 55280 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| || || || || ||| || Sbjct 55279 CGTAAGAGTCTTGACAAAGATTTGCCTG 55252 >seq1301 Length=10146 Score = 129 bits (142), Expect = 6e-25 Identities = 149/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| |||||||||||| | | |||| | | | ||||||||||||||||| Sbjct 203 GTCGACTCCTTCTGGATATTGTAATCGGCGAGCGTGCGGCCA-TCCTCGAGCTGCTTGCC 145 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| ||||| ||||| |||||||| ||||| ||| Sbjct 144 AGCGAAGATCAATCGCTGCTGGTCTGGAGGAATGCCCTCCTTGTCCTGAATCTTAGCCTT 85 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||| || | | ||| || |||| |||| || ||||||||||| || Sbjct 84 GACATTGTCGATCGTATCCGACGACTCGACCTCGAGCGTGATCGTCTTGCCGGTCAGGGT 25 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 24 CTTGACGAAGATTTGCAT 7 >seq2299 Length=200938 Score = 86.0 bits (94), Expect = 6e-12 Identities = 175/251 (70%), Gaps = 13/251 (5%) Strand=Plus/Plus Query 120494 ACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCACCGGCAAC-GCCGACGTGAAA 120552 ||| ||||||| || || |||||||| | ||| || | || || ||| || || Sbjct 139366 ACTGGCACATGAGCTTGGCATTCATGCCGATCAAA-CCGCAGGGAAGAGCCTCGGTCAAG 139424 Query 120553 AACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG-GCGAGCATAGTGTGGCCGGGCAT 120611 || |||||||| || || || |||||||| | ||| ||| | | ||| | ||| | Sbjct 139425 AATTCCTTCTCGATCTCGACGGCCTCCTTAATGATGAGCGCG---ACGGTGTCGGGG--T 139479 Query 120612 CTTGTGTTCGATGCGCGTTCGGTAGTACA---GGCACGCAAAGTCCGTGTGCAGGCCCTC 120668 | |||| | || | | || || ||| |||| |||||||| ||||| |||||||| Sbjct 139480 GAGGCCTTCGCT-CGAGGTGGG-AGAACAAGAGGCAAGCAAAGTCGGTGTGGAGGCCCTC 139537 Query 120669 GTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGAT 120728 ||| ||||| || ||||||||| || |||| |||||||| | ||| | |||||| Sbjct 139538 GTCACGCGAGATGAGCTCGTTGGAGAAGGTCAATCCGGGCATCAAGCCACGCTTCTTGAG 139597 Query 120729 GTAGAATATGG 120739 |||| |||| Sbjct 139598 CCAGAAGATGG 139608 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 121039 TTCACGATACTGTCGGCGGCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCG 121098 || ||||| | ||||| ||||||||| || || || |||||| ||| |||| |||||| Sbjct 140185 TTGACGATGCCGTCGGAGGCGGCGAAAAAGGCGAGGACGTGCGAGATGAAGTAGCGCTCG 140244 Query 121099 TCGTCCGTGAGCTTGTGCGCAAAATCGT-CATAGTCCTTGGACAGGTCGACCTCCTC 121154 ||| | ||||||||| | | |||| ||| ||||||||||||||| | ||| || Sbjct 140245 TCGGGCTTGAGCTTGTTGTCCCAGTCGTGCAT-GTCCTTGGACAGGTCCATCTCTTC 140300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483393257099920