Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1695 100 6e-16 >seq1695 Length=206671 Score = 100 bits (110), Expect = 6e-16 Identities = 670/1051 (64%), Gaps = 59/1051 (6%) Strand=Plus/Plus Query 281739 TTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAAC 281798 ||||||||||| || | || || |||||||||||| ||||| | | ||||| Sbjct 117833 TTCGTGAAGATGTAACGAGCGGAAGCCGCGTCTTTACCACCTTGCAGACGAGTACCAAAT 117892 Query 281799 TGACCCTCCGG--CAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGCCAGGT 281856 ||||| | ||| | | || ||| | ||| ||| ||||||| | | || |||||| Sbjct 117893 TGACCGTTCGGGTCGAGAA--TGTTGAGGTTGTTGGACCCGACGAACTGTTGCGCCAGGC 117950 Query 281857 TGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACAT 281916 || ||| || || || | | |||||||| || || || ||| ||||| || | Sbjct 117951 CGATGATGGTGCCTTGCAAACTCATTTCACCGTGATGGTACGCCGAGTGCTCGGCGACGT 118010 Query 281917 AACCACTGAACTGTGCTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAA---T 281973 |||| | || ||| | ||||| | || ||||| ||||| ||||| |||| Sbjct 118011 AACCGCCCAATTGTCCGACCTTGATCTCCTGCGTCAACTTGCGCTTGAA---GCAACCGA 118067 Query 281974 ATAATACTTTTCGTTGAGAAGGCTTGAAACCATCAACGACAGACGGAATGCTGCGTTCCA 282033 | || || || |||||| || ||||| ||||||| |||||| || || ||| | Sbjct 118068 ACAAGACCTTGCGTTGACCCGGTTTGAACCCATCAATGACAGAGGGGATAGAGCGCACGT 118127 Query 282034 GGTCATACCGCGAGAACAAAATAAGTTCCTTGTCAATGAAGT-CGGGAACGGGAACCTCG 282092 ||| | |||||| | || | ||||||| || || | | || |||| || ||| Sbjct 118128 TGTCGGCCATCGAGAAGAGGATCAACTCCTTGTTGATAAAATCCTCGATCGGG-ACTTCG 118186 Query 282093 GGCTTCTTGTGGTCAAGTTGGTTTCCCGGCTCGTATGCCGTC--ATCCACTCCTTGCGAT 282150 | | ||||||| || | | || || || | ||| || | ||| |||||||| | Sbjct 118187 GCGATGCTGTGGTCGAGGTACGTGCCGGGGACG-AAGCC-TCGGAGCCATTCCTTGCGGT 118244 Query 282151 CCTCGGCCCGAGTCTTGTTGAAAGAACGATCGATGAGCTC-------TCCAGAATCAGAA 282203 |||||| |||||||||| | || || | ||| ||| | || ||| Sbjct 118245 TGTCGGCCTTCTTCTTGTTGAAGGCCATGTCAATCAACTCGCGCTCTTCCTGCGTC-GAA 118303 Query 282204 GTCCACGTAAACGTCTTCATAAGAGTCTTCAGGTTGCTGAAGTAATGCTTG---GCATCA 282260 | | |||| | | | | | || ||||| ||||| |||| || || Sbjct 118304 GGGC---GGAACGGCAAGCGATGCTTGTCCATGTTGCCAAAGTA---CTTGACCGCGTCC 118357 Query 282261 GTGCTGGAACTCGTACCGAGACCCTTGTAATACTTGATTTGATACTTAGAATAATCCTTC 282320 || | ||||||||| | |||||| | |||||||| | | | | || | || Sbjct 118358 CTGGCGTCACTCGTACCCAATCCCTTGAAGTACTTGATGCGCCATCCACGACCAT-CATC 118416 Query 282321 GTGGTCTT-CACCCAATCCTCGTAATCCGGAAGACTATAAAATTCGCGAACGTCCT--TT 282377 | |||| | ||| | |||||| | |||| | ||||| | ||| |||| || Sbjct 118417 GGTCTCTTCCTTCCATTGCTCGTACTGAGGAATTGTGAAAAAT--GACAAC-TCCTTGTT 118473 Query 282378 CCTTTCTTGG-CGAC--CACGATAGGTGTGATGAACTTCTTCAAGAA-ACCTGGAATTT- 282432 || ||||| || | ||||| || |||||||||| |||||| ||| | ||| Sbjct 118474 CC--CCTTGGTCGCCTTGACGATGGGGGTGATGAACTCGAGCAAGAAGCCCTTCAGTTTG 118531 Query 282433 --CTAGGAGACTGGGAAAACAGCTATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGT 282490 | |||| || || ||| || || ||||| |||| ||||| ||||| | Sbjct 118532 AGCAAGGA----AGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATGTGCGA 118587 Query 282491 TCCGTCAACATCCGCGTCGGTCATGATCATCACATGACCGTATCTCAGAGAAGAAGTGTC 282550 ||| || |||| |||| ||||||||| | | ||||| | || || ||| Sbjct 118588 TCCATCGTGATCCTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTC 118647 Query 282551 TTTGTACACTTTACCGGTTTGAAGGCCCAAAATTTGTTTGAGCGCGGTGATTTCTTCGTT 282610 |||| ||||| || || | |||||| || || |||| ||| || || | || Sbjct 118648 GGTGTAGACTTTGCCCTGCTGCAAGCCCAAGATCTGCTTGATCGCTTGAATCTCGACATT 118707 Query 282611 CTTTGTGA-TACTTGCCACAGATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAA 282669 | || ||| | | | || || || ||||| |||||||| || || | ||| | Sbjct 118708 ATCGAGGAGGGCTTTGC-CCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGA 118766 Query 282670 AAACACCATATCTCTCGCGACCGACCACGGACAGTCCTGCAATTGCAAGTG--TTGCTGC 282727 | |||||||| | || |||||||| |||| ||| || | | || || | ||| || Sbjct 118767 AGACACCATAGTTGTCTCGACCGACGACGGCCAGACCCGACACGGCGAGCGCCTTG--GC 118824 Query 282728 GGAATCTCCCTCCGTCAAGATGAGAGTACAC 282758 ||||||||| || ||||||||||| || ||| Sbjct 118825 GGAATCTCCTTCGGTCAAGATGAGCGTGCAC 118855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057773513696750