Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1957 132 3e-26 >seq1957 Length=81828 Score = 132 bits (146), Expect = 3e-26 Identities = 208/295 (71%), Gaps = 2/295 (1%) Strand=Plus/Minus Query 25669 GGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCG 25728 |||||||| || | || |||||| | ||| || ||||| ||| ||||| | | Sbjct 77087 GGGTTCCAAGCACTCAAGATGATCCTCCTATCGGTGGGGTTTTCCTTGATACTCTTGACA 77028 Query 25729 GTGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCAT-GTCCGTGTACTC 25787 | | || |||||| |||||| |||| || || || | |||| | ||||| Sbjct 77027 GCCTGCATCAACTGATCGACCCCCTCCCCCTGATAATCATCCTTGGCCGTCC-TATACTC 76969 Query 25788 TGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTG 25847 ||| ||||| | ||||||||||||||| || |||||||| | || || |||||||| || Sbjct 76968 TGCGCCGAAGTGCCTCCACTGGAACCCATAAACCGGTCCCAAATCCCCCTCTTCCCTATG 76909 Query 25848 CTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCC 25907 | | || || ||| |||| ||| ||||| || ||||| | ||||| ||||| ||||| Sbjct 76908 CCCCAACCCAACCTTGTCCAGAAATTCTCTCGATCCATTCCCATCCCAAATCTTGACCCC 76849 Query 25908 CTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 ||| ||||| | ||| || | || || |||| |||||||| || || ||| Sbjct 76848 CTTGTCGGACAATAATTTCGAATCGGTCGATCCTCGAACGAACCAAAGGAGTTCC 76794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340122158284425