Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2894 176 7e-40 seq2307 168 1e-37 seq2696 154 2e-33 >seq2894 Length=49343 Score = 176 bits (194), Expect = 7e-40 Identities = 159/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| ||||| || ||||| |||||||||||||| Sbjct 4527 CGCGACAACATCCAGGGTATCACCAAGCCCGCTATTCGCCGTCTCGCTCGTCGTGGTGGT 4586 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || ||| |||| ||||||| || | || ||||||||||||| Sbjct 4587 GTCAAGCGTATCTCCGGCTTGATCTACGAAGAGACCCGAGGCGTCCTGAAGATCTTCCTT 4646 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 4647 GAGAACGTCATCCGTGACTCCGTCACCTACACCGAGCACGCCAAGCGCAAGACCGTCACC 4706 Query 16637 TCCATGGATATCGTCTATGC 16656 || ||||| ||||||| || Sbjct 4707 TCGCTGGATGTCGTCTACGC 4726 >seq2307 Length=1790 Score = 168 bits (186), Expect = 1e-37 Identities = 179/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || || |||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 1156 CGTGACAACATCCAGGGTATCACCAAGCCGGCCATCCGCCGTCTCGCACGTCGTGGTGGT 1215 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| |||| || || |||| ||||||| || | ||| | |||||||||||| Sbjct 1216 GTGAAGCGTATCTCCGGTCTGATCTACGAAGAGACGCGAGGTGTGCTCAAGATCTTCCTC 1275 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| |||| | || ||| ||||||||||| || || ||||| |||||| Sbjct 1276 GAGAACGTGATCCGTGATTCGGTCACCTACACCGAGCACGCCAAGCGCAAGACGGTCACC 1335 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||| ||||||| || | || || ||||| | | | || ||||| || Sbjct 1336 TCGCTCGATGTCGTCTACGCCCTCAAGCGATCCGGCCGAACGCTCTACGGTTTCGG 1391 >seq2696 Length=579 Score = 154 bits (170), Expect = 2e-33 Identities = 154/200 (77%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||||| || ||||||||||| || ||||| ||||| || ||||||||||| Sbjct 239 CGCGATAACATCCAGGGTATCACCAAGCCCGCCATCCGCCGTCTCGCGCGTCGTGGTGGT 180 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||||||| |||| || | |||| || |||| ||| | ||| | |||||||| ||| Sbjct 179 GTCAAGCGTATCTCGGGCCTCATCTACGAGGAGACTCGAGGTGTGCTCAAGATCTTTCTC 120 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| ||| |||| ||| | || ||| ||||| ||||| || || ||||| |||||| Sbjct 119 GAGAACGTCATCCGTGACTCGGTCACCTACACCGAACACGCCAAGCGCAAGACGGTCACC 60 Query 16637 TCCATGGATATCGTCTATGC 16656 || | ||| |||| || || Sbjct 59 TCGCTCGATGTCGTTTACGC 40 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79071794206425