Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3232 212 2e-49 >seq3232 Length=25038 Score = 212 bits (234), Expect = 2e-49 Identities = 508/766 (66%), Gaps = 2/766 (0%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || |||||| |||| || | | ||| || ||||| | | | || ||| | || || Sbjct 3124 TTTACCCACGCCTCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCG 3183 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 || || || | | ||||||||||| || ||||| || |||| ||||| || |||| Sbjct 3184 TGTTTCCTGGTCACCATGAAGGACGACTCGATCGAAGGCATCTACGACACGCTCAAGACG 3243 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC- 363725 || || || || ||||||| || || || || ||| | |||||||| | || || Sbjct 3244 TGCGCGCTCATCTCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCG 3303 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 || | | |||||| |||||| || |||||||| || | || |||||||| || Sbjct 3304 ACCGG-CTCTTACATCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCG 3362 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 ||| | |||| || ||| | ||||||||||| ||||| ||||| || || || Sbjct 3363 TGTCTACAACAACACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTT 3422 Query 363846 TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA 363905 || || || |||||||| || || || | || ||||| || || || || || || Sbjct 3423 CGCGATCTACCTCGAGCCATGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAA 3482 Query 363906 CACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCA 363965 | || || ||||| | || || |||||||| |||| ||| || ||| || | || | Sbjct 3483 CCACGGCAAGGAGGAGGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCT 3542 Query 363966 TTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCC 364025 |||||| |||| || ||||| | | | ||| | ||||| ||||| ||| || Sbjct 3543 GTTTATGGAGCGTGTCGAGGCCGCCAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCC 3602 Query 364026 AGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGA 364085 || || ||| || | || || || | || | | ||| || || ||| ||| Sbjct 3603 CGGCCTCCACGAAGTCTATGGCGAAGAGTTCCGCGCCTTGTTCGAGAAATACGAAAAGGA 3662 Query 364086 GGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145 ||| || ||||| || ||||| || ||||| |||| || || | || | || Sbjct 3663 GGGCCGCGCCAAGAAGACGATCCCCGCGCAAAAGCTTTGGTACGCGATTCTTGAAGCCCA 3722 Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205 | | || || || | || | ||| | ||||| || | ||| || || ||||| Sbjct 3723 GGTCGAAACCGGCAACCCGTTCATGCTCTACAAGGACGCCGCAAACAAAAAATCGAACCA 3782 Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGC 364265 || ||||||| || || || | ||| | || |||||||| || || ||| | || Sbjct 3783 AAAGAACCTTGGCACGATCAAGTCGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGC 3842 Query 364266 TCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCG 364311 ||||| ||| ||||| || ||| | || ||||||||| | ||| Sbjct 3843 GCCCGATGAGTGCGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCG 3888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303291395412950