Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq2960 107 4e-18 >seq2960 Length=54936 Score = 107 bits (118), Expect = 4e-18 Identities = 252/373 (68%), Gaps = 12/373 (3%) Strand=Plus/Plus Query 68401 TTTGCCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAA 68460 ||| |||||| || | || |||||||| || || || |||| ||||| | || | Sbjct 33891 TTTACCAAGCCTCGACCTCCGAGTTGTACGGCAAGGTCGTCGAAACCCCTCAATCCGAGA 33950 Query 68461 ATACTCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCT 68520 || || || || ||||| |||||||| || || ||||||||||| | |||||| Sbjct 33951 CGACACCCTTCTACCCTCGTTCGCCTTACGGAGTCGCCAAGTTGTACGCCTTCTGGATCG 34010 Query 68521 GTAAAAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGTTTCAATCACG 68580 || || ||||| |||||||| ||||||| | |||||| || | ||||| ||| Sbjct 34011 TCAAGAACTACCGCGAGTCGTACGACATGTACGCCTGCAACGGCATCTTGTTCAACCAC- 34069 Query 68581 AGAGTCCCAAC--AGAGGCCATCAGTTCGTGACTCGTAAAA--TCACGAAGGTGGTCGCG 68636 ||||||| | | || | || || || | || | || ||| | ||||| Sbjct 34070 -GAGTCCCCGCGTCGTGGTCGCACCTTTGTCACGAGGAAGATTTCCCGA--GCTGTCGCC 34126 Query 68637 AATATTTTCAATGGTGTCGAAA--AATGCATGTATCTCGGTAATATAGATGCCAAAAGAG 68694 | | | || | | ||| | | | ||| | || ||||| || || || ||||| | | Sbjct 34127 GAGA-TCTCGCTCG-GTCAACAGGACTGCCTTTACCTCGGCAACATGGAGGCCAAGCGTG 34184 Query 68695 ATTGGGGATATGCGAAGGATTACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTC 68754 |||||||| | ||| || ||||| || | |||||| |||||||||| ||||| || | Sbjct 34185 ATTGGGGACACGCGCGCGACTACGTCGAGGGTATGTGGATGATGCTGCAGCAAGACACCC 34244 Query 68755 CGGATGACTATGT 68767 | || |||| ||| Sbjct 34245 CCGACGACTTTGT 34257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102827363328750