Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3232 178 2e-39 seq1695 104 3e-17 seq2953 93.3 5e-14 >seq3232 Length=25038 Score = 178 bits (196), Expect = 2e-39 Identities = 562/860 (65%), Gaps = 12/860 (1%) Strand=Plus/Minus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 ||||| || |||| || || || | | |||||| | | |||||| || || || Sbjct 3881 GCGATCGAGGCCAAGTTGCAGACGGCGCACTCATCGGGCGCCGAGTACTCGATGATCTCG 3822 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || ||||| || || ||| || ||||| | ||||||||| || || ||| |||| Sbjct 3821 GTGCACAAGTTCGACGACTTGATCGTGCCAAGGTTCTTTTGGTTCGATTTTTTGTTTGCG 3762 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 || |||||||| |||||| | || | || || || |||| | ||||| || | | Sbjct 3761 GCGTCCTTGTAGAGCATGAACGGGTTGCCGGTTTCGACCTGGGCTTCAAGAATCGCGTAC 3702 Query 114650 CAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTA 114708 || | | | ||| | || | || ||||| || ||||||| ||||| || | | Sbjct 3701 CAAAGCTTTTGCG-CGGGGATCGTCTTCTTGGCGCGGCCCTCCTTTTCGTATTTCTCGAA 3643 Query 114709 GAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAA 114768 | ||| |||||||| || | | || ||| || || || | | | |||||||| Sbjct 3642 CAAGGCGCGGAACTCTTCGCCATAGACTTCGTGGAGGCCGGGGGCTTCAGCGGGGCAGAA 3583 Query 114769 GAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGC 114828 ||| | ||| | | | |||| ||||||| ||| || || || || |||||||| || Sbjct 3582 GAGGGGCCACTCGCTGGCGGCCTCGACACGCTCCATAAACAGATCGGGAATCCAGAGCGC 3523 Query 114829 TGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAA 114888 |||||||||| ||| ||| | || || | || || || || | |||| || Sbjct 3522 AAAGAAGAGATCACGAGCGCGGACCTCCTCCTTGCCGTGGTTCTTGCGAAGGTCCAGGAA 3463 Query 114889 GTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACG 114945 || | || || |||||||| || || ||||| | ||||| | || ||| Sbjct 3462 CTCGAAGACGTCAGCGTGCCATGGCTCGAGGTAGATCGCGAAGGCTCCGGGACGCTTGTT 3403 Query 114946 ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005 ||| | |||| || || | ||| ||| || | || || ||||| || | ||| || Sbjct 3402 GCCACCTTGGTCGACGTAGCGCGCGGTGTTGTTGTAGACACGGAGCATGGGGACGATGCC 3343 Query 115006 ATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATG 115063 | || | ||| || || || ||| || ||| | | || | || | |||||| Sbjct 3342 GTTCGAGTAGCCGTTCGTGCCGGCGATGTAAGAGCC--GGTCGCGCGGATGTTGTGGATG 3285 Query 115064 TGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAG 115123 || ||| ||||| || || ||| ||||| |||||||| | |||| || ||||| Sbjct 3284 CTCAAACCGATACCACCGGCGGTCTTGGAGATGAGCGCGCACGTCTTGAGCGTGTCGTAG 3225 Query 115124 ATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTT 115183 || || ||||||||||| |||| | | || ||||| || ||| | || || Sbjct 3224 ATGCCTTCGATCGAGTCGTCCTTCATGGTGACCAGGAAACACGACGAAAGCTGCGGGTGA 3165 Query 115184 GGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTA 115243 || || || ||||||||||| || || | |||||| | || | | |||||| Sbjct 3164 GGCGTTCCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTAAAGTAGCGCTCGGACATGAGG 3105 Query 115244 TCGTAGGTCTCCAAGACG-GCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCAT 115302 | ||| | || ||||||| || | ||||| | ||||| || |||| | ||| ||||| Sbjct 3104 TTGTACGACTGCAAGACGCGCTCG-ATGTCGTGACCGTGGATGCCGACGGCGACGCGCAT 3046 Query 115303 AAACATGTATTG-GGGTGTT 115321 | ||||| ||| ||| ||| Sbjct 3045 GAGCATGTGTTGCGGGCGTT 3026 >seq1695 Length=206671 Score = 104 bits (114), Expect = 3e-17 Identities = 334/506 (66%), Gaps = 23/506 (5%) Strand=Plus/Plus Query 172526 CCCTTGGAAGCCTTGATGATTGGTGTCACCA--TTGAGACCACAAACCC--CAACTTGAG 172581 ||||||| ||||||| ||| || || | | | ||| | | || ||| || ||||| Sbjct 118475 CCCTTGGTCGCCTTGACGATGGGGGTGATGAACTCGAG-CAAGAAGCCCTTCAGTTTGAG 118533 Query 172582 GAGGGATGGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATC 172641 | ||| || | |||| | || | || | ||| |||||||| ||||| || ||||| Sbjct 118534 CAAGGAAGGGAACCAGTAATCGAGGAAGTTGATGATCAGACCCTTGATGTGCGATCCATC 118593 Query 172642 GTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATA 172701 || |||| ||| | ||| ||||| ||| || || || ||| | || || || Sbjct 118594 GTGATCCTGATCGGCCATGATCATGAGCTTGCCGTAACGGAGCGAGTCGACGTCGGTGTA 118653 Query 172702 CTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT 172761 | || ||||| || | |||||||||| ||||| | ||||| ||| | | || Sbjct 118654 GACTTTGCCCTGCTGCAAGCCCAAGATCTGCTTGATCGC-TTGAA-TCTCGACATTATC- 118710 Query 172762 GAGTTGCGCCA---CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACAC 172818 ||| | || | | || || || || || |||| || || | |||||| || Sbjct 118711 GAGGAGGGCTTTGCCCGCCGCTTCACGCACGTTGAGCAACTTTCCTCGCAAAGGGAAGAC 118770 Query 172819 ACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATC 172878 ||| |||| || ||||| || || | ||||| | || ||||| | ||| |||||||| Sbjct 118771 ACCATAGTTGTCTCGACCGACGACGGCCAGACCCGACACGGCGAGCGCCTTGGCGGAATC 118830 Query 172879 ACCCTCCGTCACGATGAGCGTACACTTTCCAGATT-GTGCC--GTCCCCGCCTTGTTCGC 172935 || || |||| ||||||||| ||||| ||| || || || || || ||||| || Sbjct 118831 TCCTTCGGTCAAGATGAGCGTGCACTTG---GATCCGTTCCTCGTTCCAGCGTTGTTTGC 118887 Query 172936 ATCGTCCAACTTGGGAATACCAGTAATTTTGGA---CTTGCGGGCACCATCTGTCTTCTT 172992 ||| || | |||| | ||| || || || |||| | || || |||||||| Sbjct 118888 ATCCTCGAGCTTGACGAGACCCGTGATACGCGATCGCTTGTGT---CCGTCCGTCTTCTT 118944 Query 172993 GAGTTCCTTCATCTCCTTGAACTTGG 173018 ||| || || ||||||||||| Sbjct 118945 GAGCATCTGGTCCTGCTTGAACTTGG 118970 >seq2953 Length=106328 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 8526 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAG 8585 || ||||| || |||||||| ||| || || || || ||||||| ||| | Sbjct 86261 TACCAAGCCTCGACCTCGGAGTTGTACGGCAAGGTCGTCGAGACCCCTCAGTCCGAGACG 86320 Query 8586 ACACCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTG 8645 || |||||||| || || || ||| || ||| | ||| | || ||| |||| Sbjct 86321 ACCCCCTTCTACCCTCGCTCGCCCTACGGAGTCGCCAAGCTGTACGCCTTCTGGATCGTC 86380 Query 8646 AAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAG 8705 ||||| ||||| || || || || | | |||||| |||||| ||||||||||||||| Sbjct 86381 AAGAACTACCGCGAGTCGTACGGCATGTACGCGTGCAACGGTATCCTCTTCAACCACGAG 86440 Query 8706 TCACCCCGTCGTGGCC 8721 || ||||| ||||||| Sbjct 86441 TCCCCCCGCCGTGGCC 86456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597325785723000