Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900016695.1_202016-07-08] 3,725 sequences; 23,646,746 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3232 286 3e-72 >seq3232 Length=25038 Score = 286 bits (316), Expect = 3e-72 Identities = 743/1125 (66%), Gaps = 27/1125 (2%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | ||||||| |||||| || || ||| || ||| | || || || |||| | Sbjct 2959 TACAACTACTTTGGCTTCAAGACGCTCGAGCGCTCCTACTTGCTTCGCATCGACGGCAAG 3018 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || |||| || ||||| || |||| |||||||||||| |||| || ||||| |||||| Sbjct 3019 GTCGCCGAACGCCCGCAACACATGCTCATGCGCGTCGCCGTCGGCATCCACGGTCACGAC 3078 Query 93838 ATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTA---TACCATGGCC 93894 || | || |||| | | | || |||| || | | || |||| ||| Sbjct 3079 ATCGAGCGCGTCTTGCAGTCGTACAACCTCATGTCCGA---GCGCTACTTTACCCACGCC 3135 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | ||||| || |||||||| || || || || ||| | || |||||||||||| | Sbjct 3136 TCGCCGACGCTCTTCAACGCCGGAACGCCTCACCCGCAGCTTTCGTCGTGTTTCCTGGTC 3195 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 || | |||| |||||| ||| || || | ||||| |||||| || ||| |||| Sbjct 3196 ACCATGAAGGACGACTCGATCGAAGGCATCTACGACACGCTCAAGACGTGCGCGCTCATC 3255 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || ||||| | || ||||| || | || || | || || ||| Sbjct 3256 TCCAAGACCGCCGGTGGTATCGGTTTGAGCATCCACAACATCCGCGCGACCGGCTCTTAC 3315 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| || || ||| ||| |||||| ||||||| |||||||| |||| ||||||| Sbjct 3316 ATCGCCGGCACGAACGGCTACTCGAACGGCATCGTCCCCATGCTCCGTGTCTACAACAAC 3375 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | ||||||||||| ||||| ||||| | | | || | |||||| |||| ||| Sbjct 3376 ACCGCGCGCTACGTCGACCAAGGTGGCAACAAGCGTCCCGGAGCCTTCGCGATCTACCTC 3435 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| ||||| | ||| | ||||| || |||||||||||||| || Sbjct 3436 GAGCCATGGCACGCTGACGTCTTCGAGTTCCTGGACCTTCGCAAGAACCACGGCAAGGAG 3495 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | || | || ||||||| || |||||| | || || || |||||| | || Sbjct 3496 GAGGTCCGCGCTCGTGATCTCTTCTTTGCGCTCTGGATTCCCGATCTGTTTATGGAGCGT 3555 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||| | || ||| || || || ||| |||| ||||| || ||| Sbjct 3556 GTCGAGGCCGCCAGCGAGTGGCCCCTCTTCTGCCCCGCTGAAGCCCCCGGCCTCCACGAA 3615 Query 94375 GTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 || | ||| | ||| | | ||||| | |||||| | ||||| |||| Sbjct 3616 GTCTATGGCGAAGAGTTCCG-CGCCTTGTTCGAGAAATACGAAAAGGAGGGCCGCGCCAA 3674 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 |||| || || ||||| ||| | ||| | || | ||||| || || || Sbjct 3675 GAAGACGATCCCCGCGCAAAAGCTTTGGTACGCGATTCTTGAAGCCCAGGTCGAAACCGG 3734 Query 94494 TACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGG 94553 | || | ||| | | ||||||| | | ||| || || ||||| || |||| || Sbjct 3735 CAACCCGTTCATGCTCTACAAGGACGCCGCAAACAAAAAATCGAACCAAAAGAACCTTGG 3794 Query 94554 GGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGAT 94613 ||||||| ||||| ||||||||||||| ||||||| | | || || ||| Sbjct 3795 CACGATCAAGTCGTCGAACTTGTGCACCGAGATCATCGAGTACTCGGCGCCCGATGAGTG 3854 Query 94614 TGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTAC-ACGT 94672 || || || ||| ||| ||| ||| || | | ||| | | ||| || ||| Sbjct 3855 CGCCGTCTGCAACTTGGCCTCGATCGCGTTGCCGAGCTTCAT-CAAGA-----ACGGCGT 3908 Query 94673 CTACTGCTTCGTTCG-ATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTTGAAC 94731 ||| ||| | | | || | ||| | || || ||| | | || ||| Sbjct 3909 GTACGACTT--TAAGAAGTTGCACGAGGTCGTCAAGGTCG---------TCGCTTTCAAC 3957 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 ||||| | | |||||| |||| ||| |||||| |||||| ||||||| ||| | Sbjct 3958 TTGAACCGCATCATCGACGTCAACTACTATCCCGTCATCGAGGCGCAGAACTCCAACTTC 4017 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCG 94836 || || |||||||||||||| || || ||| |||| |||||| Sbjct 4018 CGCCACCGCCCCATCGGCATCGGAGTGCAAGGTCTCGCCGACGCG 4062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494700164451000